LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-84D1.2
hsa-miR-205-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000568143
Biotype: lincRNA
Gene id: ENSG00000261025
Gene Name: RP11-84D1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
86-98
0.034
1
CTD-2165H16.4
hsa-miR-205-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000563101
Biotype: antisense
Gene id: ENSG00000261360
Gene Name: CTD-2165H16.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
476-493
0.021
1
7mer
2592-2617
0.010
0
6mer
1032-1042
0.002
3
6mer
451-475
0.002
1
RP11-58G13.1
hsa-miR-205-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000586106
Biotype: antisense
Gene id: ENSG00000267039
Gene Name: RP11-58G13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
160-182
0.034
1
MMP24-AS1
hsa-miR-205-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000456350
Biotype: antisense
Gene id: ENSG00000126005
Gene Name: MMP24-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
135-157
0.020
4
7mer
474-499
0.014
2
RP11-213G2.2
hsa-miR-205-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000439544
Biotype: lincRNA
Gene id: ENSG00000230303
Gene Name: RP11-213G2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
427-445
0.034
2
TET2-AS1
hsa-miR-205-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515414
Biotype: antisense
Gene id: ENSG00000251586
Gene Name: TET2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
425-445
0.034
1
XLOC_002336
hsa-miR-205-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004460
Biotype: transcript isomorph
Gene id: XLOC_002336
Gene Name: XLOC_002336
UCSC graphic: -
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant
- Prostate Normal/Primary
- Testes Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
197-220
0.020
3
7mer
13-38
0.014
2
XLOC_006850
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014769
Biotype: transcript isomorph
Gene id: XLOC_006850
Gene Name: XLOC_006850
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
270-291
0.034
1
CTD-2541J13.2
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583493
Biotype: antisense
Gene id: ENSG00000263424
Gene Name: CTD-2541J13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
100-116
0.029
0
7mer
2716-2742
0.005
1
RP11-258B16.1
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000591558
Biotype: lincRNA
Gene id: ENSG00000267642
Gene Name: RP11-258B16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1478-1497
0.034
2
LINC01468
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000435813
Biotype: lincRNA
Gene id: ENSG00000231131
Gene Name: LINC01468
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
212-234
0.026
2
6mer
824-847
0.005
2
6mer
858-883
0.003
1
FTX
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000429124
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2107-2128
0.024
2
7mer
2537-2556
0.008
0
6mer
1427-1445
0.002
1
RP11-248E9.5
hsa-miR-205-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551280
Biotype: lincRNA
Gene id: ENSG00000257912
Gene Name: RP11-248E9.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
205-223
0.034
1
RP11-521D12.2
hsa-miR-205-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000483023
Biotype: lincRNA
Gene id: ENSG00000244260
Gene Name: RP11-521D12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
401-426
0.025
2
6mer
1607-1620
0.004
0
6mer
7-28
0.003
0
6mer
1672-1684
0.002
1
RP11-201E8.1
hsa-miR-205-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462011
Biotype: lincRNA
Gene id: ENSG00000244464
Gene Name: RP11-201E8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1066-1087
0.015
0
7mer
1969-1976
0.009
0
6mer
297-315
0.003
2
6mer
1889-1905
0.003
0
6mer
1273-1296
0.003
0
XLOC_002909
hsa-miR-205-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005388
Biotype: transcript isomorph
Gene id: XLOC_002909
Gene Name: XLOC_002909
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1280-1300
0.017
1
7mer
78-98
0.017
4
RP11-68L18.1
hsa-miR-205-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519233
Biotype: antisense
Gene id: ENSG00000246792
Gene Name: RP11-68L18.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
630-654
0.021
1
7mer
331-344
0.013
1
CTD-3162L10.1
hsa-miR-205-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586340
Biotype: lincRNA
Gene id: ENSG00000267053
Gene Name: CTD-3162L10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2162-2178
0.029
1
7mer
1692-1711
0.003
Not Conserved
6mer
1410-1435
0.002
0
XLOC_001313
hsa-miR-205-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004663
Biotype: transcript isomorph
Gene id: XLOC_001313
Gene Name: XLOC_001313
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-172
0.034
0
CTD-3162L10.1
hsa-miR-205-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000600983
Biotype: lincRNA
Gene id: ENSG00000267053
Gene Name: CTD-3162L10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2162-2178
0.029
1
7mer
1692-1711
0.003
Not Conserved
6mer
1410-1435
0.002
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept