LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC092071.1
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597260
Biotype: sense_intronic
Gene id: ENSG00000269353
Gene Name: AC092071.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
402-426
0.039
0
6mer
326-346
0.003
1
6mer
190-209
0.002
0
XLOC_003397
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00007353
Biotype: transcript isomorph
Gene id: XLOC_003397
Gene Name: XLOC_003397
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
5585-5612
0.043
0
6mer
3081-3104
0.001
Not Conserved
6mer
1978-1990
0.001
Not Conserved
LINC00862
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000367355
Biotype: lincRNA
Gene id: ENSG00000203721
Gene Name: LINC00862
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1299-1324
0.038
1
6mer
170-188
0.003
1
6mer
178-203
0.003
0
CTD-2561J22.5
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594557
Biotype: retained_intron
Gene id: ENSG00000268119
Gene Name: CTD-2561J22.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4112-4127
0.043
1
6mer
2418-2431
0.002
0
LINC00963
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000412141
Biotype: lincRNA
Gene id: ENSG00000204054
Gene Name: LINC00963
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
565-591
0.044
1
TRAF3IP2-AS1
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000531702
Biotype: antisense
Gene id: ENSG00000255389
Gene Name: TRAF3IP2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1605-1627
0.033
6
6mer
2335-2354
0.004
1
6mer
2257-2276
0.004
2
6mer
2193-2213
0.003
1
6mer
1654-1678
0.001
0
XLOC_002173
hsa-miR-205-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004315
Biotype: transcript isomorph
Gene id: XLOC_002173
Gene Name: XLOC_002173
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HepG2 Liver Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
90-109
0.031
1
6mer
296-320
0.007
1
6mer
341-368
0.007
1
RP11-753D20.4
hsa-miR-205-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000563140
Biotype: lincRNA
Gene id: ENSG00000259998
Gene Name: RP11-753D20.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
270-288
0.021
0
7mer
1821-1838
0.013
3
7mer
1584-1607
0.007
1
6mer
2122-2149
0.003
1
XLOC_009682
hsa-miR-205-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020351
Biotype: transcript isomorph
Gene id: XLOC_009682
Gene Name: XLOC_009682
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
437-458
0.044
1
RP11-1070N10.3
hsa-miR-205-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554161
Biotype: lincRNA
Gene id: ENSG00000258572
Gene Name: RP11-1070N10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
751-773
0.044
0
FAM226B
hsa-miR-205-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602508
Biotype: sense_intronic
Gene id: ENSG00000269911
Gene Name: FAM226B
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
106-129
0.044
3
LINC01192
hsa-miR-205-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000488287
Biotype: lincRNA
Gene id: ENSG00000241369
Gene Name: LINC01192
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
357-375
0.044
1
XLOC_008878
hsa-miR-205-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017740
Biotype: transcript isomorph
Gene id: XLOC_008878
Gene Name: XLOC_008878
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
855-877
0.031
0
6mer
1535-1556
0.013
0
MIRLET7DHG
hsa-miR-205-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000602602
Biotype: lincRNA
Gene id: ENSG00000230262
Gene Name: MIRLET7DHG
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
388-412
0.033
2
6mer
46-58
0.007
3
6mer
1093-1113
0.003
1
AC013733.4
hsa-miR-205-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449835
Biotype: lincRNA
Gene id: ENSG00000225570
Gene Name: AC013733.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
358-376
0.044
1
RP11-420K14.8
hsa-miR-205-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598561
Biotype: lincRNA
Gene id: ENSG00000268184
Gene Name: RP11-420K14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
193-216
0.044
1
AC079354.3
hsa-miR-205-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000409819
Biotype: antisense
Gene id: ENSG00000222035
Gene Name: AC079354.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2117-2141
0.031
4
6mer
1940-1951
0.004
5
6mer
2753-2772
0.004
2
6mer
1001-1026
0.002
2
6mer
2683-2705
0.002
1
XLOC_012598
hsa-miR-205-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026224
Biotype: transcript isomorph
Gene id: XLOC_012598
Gene Name: XLOC_012598
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1127-1152
0.032
0
6mer
1376-1401
0.010
0
6mer
253-274
0.002
Not Conserved
FTX
hsa-miR-205-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000455395
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20-41
0.031
2
7mer
337-354
0.012
4
XLOC_007036
hsa-miR-205-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014957
Biotype: transcript isomorph
Gene id: XLOC_007036
Gene Name: XLOC_007036
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
230-255
0.044
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept