LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
MIR181A2HG
hsa-miR-205-5p
0.894
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000429139
Biotype: antisense
Gene id: ENSG00000224020
Gene Name: MIR181A2HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
515-536
0.046
1
LINC00941
hsa-miR-205-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551972
Biotype: lincRNA
Gene id: ENSG00000235884
Gene Name: LINC00941
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
18-44
0.045
1
RP11-696N14.1
hsa-miR-205-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506454
Biotype: antisense
Gene id: ENSG00000246090
Gene Name: RP11-696N14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
284-309
0.043
2
6mer
326-342
0.002
Not Conserved
XLOC_003704
hsa-miR-205-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008261
Biotype: transcript isomorph
Gene id: XLOC_003704
Gene Name: XLOC_003704
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
834-850
0.042
0
6mer
253-270
0.003
1
AC007278.3
hsa-miR-205-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000450893
Biotype: sense_intronic
Gene id: ENSG00000234389
Gene Name: AC007278.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
263-288
0.041
0
6mer
571-591
0.004
0
CTD-2023N9.1
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506106
Biotype: antisense
Gene id: ENSG00000250961
Gene Name: CTD-2023N9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
22-46
0.042
1
6mer
396-409
0.003
2
LARGE-AS1
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000438159
Biotype: antisense
Gene id: ENSG00000224973
Gene Name: LARGE-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1383-1397
0.022
1
8mer
2030-2049
0.021
Not Conserved
6mer
634-653
0.001
1
LINC00238
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000389594
Biotype: lincRNA
Gene id: ENSG00000196553
Gene Name: LINC00238
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
211-231
0.023
4
7mer
625-651
0.014
2
6mer
463-477
0.008
7
RP11-400N13.2
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000441160
Biotype: lincRNA
Gene id: ENSG00000228437
Gene Name: RP11-400N13.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
449-466
0.034
1
7mer
285-305
0.006
0
6mer
942-969
0.005
1
AC007740.1
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446838
Biotype: antisense
Gene id: ENSG00000237750
Gene Name: AC007740.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
265-285
0.026
1
8mer+wobble
941-958
0.011
1
7mer
2049-2070
0.006
2
6mer
1421-1437
0.002
1
XLOC_007206
hsa-miR-205-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014530
Biotype: transcript isomorph
Gene id: XLOC_007206
Gene Name: XLOC_007206
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
155-166
0.032
0
7mer
1264-1288
0.004
1
6mer
5206-5229
0.004
1
6mer
4399-4417
0.002
1
6mer
1287-1301
0.002
1
6mer
2321-2336
0.002
1
XLOC_012861
hsa-miR-205-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026540
Biotype: transcript isomorph
Gene id: XLOC_012861
Gene Name: XLOC_012861
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
386-407
0.045
3
XLOC_008422
hsa-miR-205-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018143
Biotype: transcript isomorph
Gene id: XLOC_008422
Gene Name: XLOC_008422
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
545-562
0.045
0
RNF139-AS1
hsa-miR-205-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_108047.1
Biotype: lincRNA
Gene id: NR_108047.1 (gene)
Gene Name: RNF139-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
161-172
0.031
0
7mer
1270-1294
0.004
1
6mer
5212-5235
0.004
1
6mer
4405-4423
0.002
1
6mer
1293-1307
0.002
1
6mer
2327-2342
0.002
1
XLOC_010249
hsa-miR-205-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020984
Biotype: transcript isomorph
Gene id: XLOC_010249
Gene Name: XLOC_010249
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
162-175
0.042
1
6mer
11-33
0.003
1
RP11-315O6.1
hsa-miR-205-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528717
Biotype: antisense
Gene id: ENSG00000255337
Gene Name: RP11-315O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
406-433
0.035
1
7mer
39-61
0.006
2
6mer
96-118
0.004
4
XLOC_005882
hsa-miR-205-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012335
Biotype: transcript isomorph
Gene id: XLOC_005882
Gene Name: XLOC_005882
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
177-191
0.045
1
RP11-92B11.3
hsa-miR-205-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000578710
Biotype: antisense
Gene id: ENSG00000264673
Gene Name: RP11-92B11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
349-368
0.026
0
6mer
324-347
0.010
0
6mer
334-355
0.009
0
LINC00548
hsa-miR-205-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000617777
Biotype: lincRNA
Gene id: ENSG00000278772
Gene Name: LINC00548
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Liver Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13-31
0.025
1
7mer
1809-1833
0.014
1
6mer
685-708
0.004
2
6mer
1491-1505
0.002
0
RNF139-AS1
hsa-miR-205-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000499418
Biotype: lincRNA
Gene id: ENSG00000245149
Gene Name: RNF139-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
169-180
0.031
0
7mer
1278-1302
0.004
1
6mer
5220-5243
0.004
1
6mer
4413-4431
0.002
1
6mer
1301-1315
0.002
1
6mer
2335-2350
0.002
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept