LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-190b


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-691G17.1
hsa-miR-190b
0.932
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000567488
Biotype: lincRNA
Gene id: ENSG00000261826
Gene Name: RP11-691G17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1961-1980
0.030
1
8mer
1841-1864
0.012
0
6mer
400-416
0.011
1
XLOC_006468
hsa-miR-190b
0.932
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00012911
Biotype: transcript isomorph
Gene id: XLOC_006468
Gene Name: XLOC_006468
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2704-2729
0.046
1
7mer
1525-1546
0.003
0
7mer
1379-1401
0.003
0
6mer
1648-1665
0.001
0
RP11-380D23.1
hsa-miR-190b
0.931
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000503998
Biotype: antisense
Gene id: ENSG00000250511
Gene Name: RP11-380D23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1223-1246
0.039
4
7mer
547-573
0.014
1
XLOC_003406
hsa-miR-190b
0.931
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006773
Biotype: transcript isomorph
Gene id: XLOC_003406
Gene Name: XLOC_003406
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
472-491
0.053
1
LINC01095
hsa-miR-190b
0.929
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505848
Biotype: lincRNA
Gene id: ENSG00000248809
Gene Name: LINC01095
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
283-300
0.053
0
XLOC_009792
hsa-miR-190b
0.927
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020461
Biotype: transcript isomorph
Gene id: XLOC_009792
Gene Name: XLOC_009792
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
774-791
0.052
Not Conserved
AC116035.2
hsa-miR-190b
0.927
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000431057
Biotype: lincRNA
Gene id: ENSG00000227549
Gene Name: AC116035.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18-41
0.052
1
LINC01095
hsa-miR-190b
0.925
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515703
Biotype: lincRNA
Gene id: ENSG00000248809
Gene Name: LINC01095
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
302-319
0.052
0
XLOC_002749
hsa-miR-190b
0.925
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006148
Biotype: transcript isomorph
Gene id: XLOC_002749
Gene Name: XLOC_002749
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Breast Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2564-2579
0.045
1
6mer
2468-2489
0.004
1
6mer
2527-2546
0.003
1
FLJ41278
hsa-miR-190b
0.925
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_033988.1
Biotype: lincRNA
Gene id: NR_033988.1 (gene)
Gene Name: FLJ41278
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3145-3160
0.052
1
RP11-88I18.2
hsa-miR-190b
0.925
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000590767
Biotype: antisense
Gene id: ENSG00000233178
Gene Name: RP11-88I18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
894-920
0.025
4
8mer
365-391
0.016
0
7mer
147-163
0.011
1
RP11-277P12.9
hsa-miR-190b
0.924
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000535911
Biotype: lincRNA
Gene id: ENSG00000256155
Gene Name: RP11-277P12.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
448-468
0.052
0
RP11-321E2.4
hsa-miR-190b
0.923
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504998
Biotype: lincRNA
Gene id: ENSG00000249662
Gene Name: RP11-321E2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
142-165
0.051
0
HOXC-AS2
hsa-miR-190b
0.923
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000604081
Biotype: retained_intron
Gene id: ENSG00000250133
Gene Name: HOXC-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
145-168
0.051
8
RP11-764K9.1
hsa-miR-190b
0.922
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000417843
Biotype: lincRNA
Gene id: ENSG00000225411
Gene Name: RP11-764K9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
296-315
0.051
0
XXbac-BCX196D17.5
hsa-miR-190b
0.920
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000419702
Biotype: lincRNA
Gene id: ENSG00000227206
Gene Name: XXbac-BCX196D17.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
358-377
0.051
0
RP11-321E2.4
hsa-miR-190b
0.919
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503267
Biotype: lincRNA
Gene id: ENSG00000249662
Gene Name: RP11-321E2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
142-165
0.050
0
XLOC_011448
hsa-miR-190b
0.919
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023648
Biotype: transcript isomorph
Gene id: XLOC_011448
Gene Name: XLOC_011448
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7411-7437
0.014
9
8mer
9891-9908
0.012
1
9mer
838-856
0.011
Not Conserved
7mer
8580-8607
0.007
Not Conserved
7mer
4304-4315
0.005
6
6mer
8557-8572
0.001
0
6mer
8563-8572
0.001
0
RP11-108M9.1
hsa-miR-190b
0.919
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422345
Biotype: lincRNA
Gene id: ENSG00000223643
Gene Name: RP11-108M9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
16-29
0.050
0
RP11-749H17.1
hsa-miR-190b
0.914
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000586386
Biotype: sense_intronic
Gene id: ENSG00000266988
Gene Name: RP11-749H17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
529-552
0.049
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept