LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-190b


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_013681
hsa-miR-190b
0.769
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028330
Biotype: transcript isomorph
Gene id: XLOC_013681
Gene Name: XLOC_013681
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
462-483
0.030
0
RP11-387A1.5
hsa-miR-190b
0.769
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608941
Biotype: antisense
Gene id: ENSG00000272729
Gene Name: RP11-387A1.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1092-1106
0.030
10
XLOC_002909
hsa-miR-190b
0.769
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005388
Biotype: transcript isomorph
Gene id: XLOC_002909
Gene Name: XLOC_002909
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2090-2117
0.019
2
6mer
251-275
0.006
5
6mer
26-46
0.003
2
6mer
1887-1903
0.002
1
LINC00461
hsa-miR-190b
0.768
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000500197
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
67-79
0.023
6
7mer
1022-1046
0.005
1
6mer
2128-2147
0.002
1
CTB-46B19.2
hsa-miR-190b
0.767
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504658
Biotype: antisense
Gene id: ENSG00000249593
Gene Name: CTB-46B19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
12-31
0.030
0
XLOC_001765
hsa-miR-190b
0.767
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003057
Biotype: transcript isomorph
Gene id: XLOC_001765
Gene Name: XLOC_001765
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1198-1210
0.020
1
7mer
343-348
0.011
1
AC010976.2
hsa-miR-190b
0.765
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000598065
Biotype: antisense
Gene id: ENSG00000231731
Gene Name: AC010976.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
687-699
0.030
2
RP11-180M15.6
hsa-miR-190b
0.765
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000619780
Biotype: lincRNA
Gene id: ENSG00000275963
Gene Name: RP11-180M15.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
27-51
0.019
1
7mer
591-605
0.011
1
AC097467.2
hsa-miR-190b
0.765
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000610249
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
721-746
0.030
0
CTD-2547L16.1
hsa-miR-190b
0.765
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517747
Biotype: antisense
Gene id: ENSG00000245281
Gene Name: CTD-2547L16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
91-107
0.030
1
RP11-48G14.3
hsa-miR-190b
0.764
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000612282
Biotype: antisense
Gene id: ENSG00000277245
Gene Name: RP11-48G14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
100-116
0.023
Not Conserved
6mer
393-410
0.006
0
RP11-568A19.1
hsa-miR-190b
0.764
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566236
Biotype: lincRNA
Gene id: ENSG00000259819
Gene Name: RP11-568A19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
67-82
0.018
Not Conserved
6mer
304-318
0.012
6
AJ239322.1
hsa-miR-190b
0.763
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419362
Biotype: lincRNA
Gene id: ENSG00000235615
Gene Name: AJ239322.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
581-601
0.023
2
6mer
127-148
0.007
1
RP11-434D9.1
hsa-miR-190b
0.763
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000514368
Biotype: lincRNA
Gene id: ENSG00000249364
Gene Name: RP11-434D9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
632-654
0.030
Not Conserved
RP11-1096G20.5
hsa-miR-190b
0.762
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000580270
Biotype: antisense
Gene id: ENSG00000266368
Gene Name: RP11-1096G20.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
73-99
0.030
1
XLOC_001583
hsa-miR-190b
0.761
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002713
Biotype: transcript isomorph
Gene id: XLOC_001583
Gene Name: XLOC_001583
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
171-189
0.026
Not Conserved
6mer
1220-1245
0.003
1
XLOC_011447
hsa-miR-190b
0.761
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023647
Biotype: transcript isomorph
Gene id: XLOC_011447
Gene Name: XLOC_011447
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1001-1020
0.030
0
LINC00461
hsa-miR-190b
0.761
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505030
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
67-79
0.023
6
7mer
1022-1046
0.005
1
6mer
2128-2147
0.002
1
FLJ26245
hsa-miR-190b
0.761
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566900
Biotype: lincRNA
Gene id: ENSG00000261122
Gene Name: FLJ26245
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1420-1445
0.030
Not Conserved
AC010976.2
hsa-miR-190b
0.759
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000596439
Biotype: antisense
Gene id: ENSG00000231731
Gene Name: AC010976.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-190b
Sequence: ugauauguuugauauuggguu
MirBase ID: MIMAT0004929
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
951-963
0.029
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept