LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-182-5p


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Gene
miRNA
Score
DIANA Links
DAB1-AS1
hsa-miR-182-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000592753
Biotype: antisense
Gene id: ENSG00000226759
Gene Name: DAB1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
15-28
0.025
5
PRKCQ-AS1
hsa-miR-182-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000624974
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
998-1015
0.025
1
RP11-231E19.1
hsa-miR-182-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000562796
Biotype: lincRNA
Gene id: ENSG00000260059
Gene Name: RP11-231E19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2600-2616
0.010
1
7mer
2320-2340
0.009
0
6mer
407-430
0.004
1
6mer
1384-1402
0.002
1
LINC00664
hsa-miR-182-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596203
Biotype: lincRNA
Gene id: ENSG00000268658
Gene Name: LINC00664
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
436-444
0.016
0
7mer
76-84
0.009
Not Conserved
AC007003.1
hsa-miR-182-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000439318
Biotype: sense_intronic
Gene id: ENSG00000231183
Gene Name: AC007003.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
139-156
0.021
6
6mer
221-239
0.005
0
AC005008.2
hsa-miR-182-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000431501
Biotype: lincRNA
Gene id: ENSG00000237896
Gene Name: AC005008.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
139-162
0.023
3
6mer
193-217
0.002
0
MEG3
hsa-miR-182-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000424076
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2665-2669
0.010
2
7mer
1868-1890
0.008
1
6mer
1490-1507
0.005
7
6mer
157-173
0.003
2
PRKCQ-AS1
hsa-miR-182-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000613985
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
698-709
0.025
1
RP11-278H7.3
hsa-miR-182-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000440148
Biotype: lincRNA
Gene id: ENSG00000237759
Gene Name: RP11-278H7.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
16-32
0.025
9
XLOC_007642
hsa-miR-182-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016267
Biotype: transcript isomorph
Gene id: XLOC_007642
Gene Name: XLOC_007642
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
363-377
0.025
5
RP11-166P13.4
hsa-miR-182-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000576014
Biotype: antisense
Gene id: ENSG00000263089
Gene Name: RP11-166P13.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4147-4162
0.008
4
7mer
774-801
0.007
2
6mer
4093-4113
0.005
1
6mer
836-850
0.003
3
6mer
1572-1596
0.002
1
THRB-AS1
hsa-miR-182-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_046244.1
Biotype: antisense
Gene id: NR_046244.1 (gene)
Gene Name: THRB-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
188-211
0.014
5
6mer
128-135
0.006
4
6mer
596-611
0.005
4
CTD-3051D23.1
hsa-miR-182-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556430
Biotype: lincRNA
Gene id: ENSG00000258811
Gene Name: CTD-3051D23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2802-2820
0.019
1
6mer
884-893
0.006
1
KB-1674E1.1
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623776
Biotype: sense_intronic
Gene id: ENSG00000280413
Gene Name: KB-1674E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3761-3782
0.025
1
RP11-147C23.1
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000623349
Biotype: lincRNA
Gene id: ENSG00000237435
Gene Name: RP11-147C23.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-32
0.025
2
AC022007.5
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000383808
Biotype: lincRNA
Gene id: ENSG00000206567
Gene Name: AC022007.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
41-66
0.025
0
XLOC_003284
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00007279
Biotype: transcript isomorph
Gene id: XLOC_003284
Gene Name: XLOC_003284
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1115-1133
0.016
0
6mer
1269-1287
0.007
1
6mer
636-651
0.003
0
AP000233.2
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000453802
Biotype: lincRNA
Gene id: ENSG00000232512
Gene Name: AP000233.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
210-228
0.025
1
RP11-60H5.1
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000567718
Biotype: lincRNA
Gene id: ENSG00000260840
Gene Name: RP11-60H5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
74-99
0.025
2
RP3-380B4.1
hsa-miR-182-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000448001
Biotype: lincRNA
Gene id: ENSG00000229639
Gene Name: RP3-380B4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
186-208
0.021
3
6mer
83-104
0.004
0
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