LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-182-5p


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Gene
miRNA
Score
DIANA Links
CTB-131B5.2
hsa-miR-182-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508713
Biotype: sense_intronic
Gene id: ENSG00000250069
Gene Name: CTB-131B5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
857-873
0.039
1
RP11-272L13.3
hsa-miR-182-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000602672
Biotype: lincRNA
Gene id: ENSG00000269998
Gene Name: RP11-272L13.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
33-58
0.039
9
RP11-392O17.2
hsa-miR-182-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000612055
Biotype: lincRNA
Gene id: ENSG00000277007
Gene Name: RP11-392O17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
734-754
0.035
2
6mer
910-931
0.004
5
RP11-93G5.1
hsa-miR-182-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000617568
Biotype: lincRNA
Gene id: ENSG00000274317
Gene Name: RP11-93G5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
255-274
0.025
1
7mer
3872-3893
0.008
1
6mer
3580-3603
0.002
0
6mer
3768-3783
0.002
1
6mer
2502-2527
0.001
1
6mer
2593-2615
0.000
1
LINC01102
hsa-miR-182-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000429464
Biotype: lincRNA
Gene id: ENSG00000235597
Gene Name: LINC01102
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1309-1322
0.022
1
7mer
427-440
0.012
0
7mer
673-685
0.005
1
RP11-366L5.1
hsa-miR-182-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000567327
Biotype: antisense
Gene id: ENSG00000260742
Gene Name: RP11-366L5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3527-3548
0.030
0
7mer
2630-2653
0.009
1
ZNRD1-AS1
hsa-miR-182-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000452229
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3624-3638
0.024
0
8mer
850-867
0.014
4
LINC00670
hsa-miR-182-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577863
Biotype: lincRNA
Gene id: ENSG00000179136
Gene Name: LINC00670
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
309-329
0.038
1
XLOC_008764
hsa-miR-182-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018899
Biotype: transcript isomorph
Gene id: XLOC_008764
Gene Name: XLOC_008764
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Liver Normal/Primary
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
410-424
0.038
0
XXbac-BPGBPG55C20.2
hsa-miR-182-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606125
Biotype: lincRNA
Gene id: ENSG00000272316
Gene Name: XXbac-BPGBPG55C20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1395-1416
0.024
1
7mer
1645-1661
0.007
3
7mer
3881-3905
0.005
1
6mer
2516-2539
0.002
1
CTD-3105H18.13
hsa-miR-182-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000563695
Biotype: lincRNA
Gene id: ENSG00000261280
Gene Name: CTD-3105H18.13
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7-17
0.038
0
RP4-597A16.2
hsa-miR-182-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000563570
Biotype: antisense
Gene id: ENSG00000259961
Gene Name: RP4-597A16.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
434-449
0.038
0
XLOC_006244
hsa-miR-182-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013587
Biotype: transcript isomorph
Gene id: XLOC_006244
Gene Name: XLOC_006244
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
644-668
0.038
0
RP11-379F4.7
hsa-miR-182-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000607624
Biotype: lincRNA
Gene id: ENSG00000272087
Gene Name: RP11-379F4.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
105-124
0.022
3
7mer
459-472
0.016
1
XLOC_003704
hsa-miR-182-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008261
Biotype: transcript isomorph
Gene id: XLOC_003704
Gene Name: XLOC_003704
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
790-807
0.025
1
7mer
635-657
0.013
1
RP4-639J15.3
hsa-miR-182-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000594086
Biotype: lincRNA
Gene id: ENSG00000269446
Gene Name: RP4-639J15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-412
0.038
1
RP1-232P20.1
hsa-miR-182-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000602284
Biotype: antisense
Gene id: ENSG00000269985
Gene Name: RP1-232P20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
205-223
0.028
3
7mer
365-383
0.010
1
XLOC_013531
hsa-miR-182-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028172
Biotype: transcript isomorph
Gene id: XLOC_013531
Gene Name: XLOC_013531
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2701-2722
0.022
1
9mer
1540-1561
0.013
0
6mer
1736-1749
0.002
1
6mer
2764-2772
0.001
2
RP11-61F12.1
hsa-miR-182-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564809
Biotype: antisense
Gene id: ENSG00000261471
Gene Name: RP11-61F12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2138-2156
0.035
2
6mer
523-537
0.003
1
LINC01470
hsa-miR-182-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506723
Biotype: lincRNA
Gene id: ENSG00000249484
Gene Name: LINC01470
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1558-1585
0.019
2
7mer
1654-1675
0.018
0
6mer
1587-1601
0.002
0
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