LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-182-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013270
hsa-miR-182-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027231
Biotype: transcript isomorph
Gene id: XLOC_013270
Gene Name: XLOC_013270
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
160-174
0.039
0
RP11-796E2.4
hsa-miR-182-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000499685
Biotype: antisense
Gene id: ENSG00000245904
Gene Name: RP11-796E2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5654-5677
0.031
1
6mer
455-480
0.006
4
6mer
876-888
0.002
1
XLOC_002612
hsa-miR-182-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005982
Biotype: transcript isomorph
Gene id: XLOC_002612
Gene Name: XLOC_002612
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1876-1903
0.031
1
7mer
509-529
0.009
1
LARS2-AS1
hsa-miR-182-5p
0.852
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000442534
Biotype: antisense
Gene id: ENSG00000232455
Gene Name: LARS2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
413-433
0.039
1
XLOC_003724
hsa-miR-182-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008282
Biotype: transcript isomorph
Gene id: XLOC_003724
Gene Name: XLOC_003724
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-367
0.039
1
RP11-67L2.2
hsa-miR-182-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000610128
Biotype: lincRNA
Gene id: ENSG00000273033
Gene Name: RP11-67L2.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5245-5262
0.030
3
6mer
4724-4745
0.003
0
6mer
1550-1572
0.002
1
6mer
3053-3071
0.002
1
6mer
3179-3188
0.001
0
6mer
3179-3193
0.000
1
RBMS3-AS3
hsa-miR-182-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_109804.1
Biotype: lincRNA
Gene id: NR_109804.1 (gene)
Gene Name: RBMS3-AS3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
680-704
0.021
5
7mer
27-41
0.018
1
XLOC_013461
hsa-miR-182-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028105
Biotype: transcript isomorph
Gene id: XLOC_013461
Gene Name: XLOC_013461
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
180-207
0.039
6
XLOC_005737
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011496
Biotype: transcript isomorph
Gene id: XLOC_005737
Gene Name: XLOC_005737
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
704-720
0.035
10
7mer
1422-1434
0.004
0
XLOC_007546
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016148
Biotype: transcript isomorph
Gene id: XLOC_007546
Gene Name: XLOC_007546
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
751-760
0.031
7
7mer
34-52
0.008
1
TMEM254-AS1
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000448729
Biotype: antisense
Gene id: ENSG00000230091
Gene Name: TMEM254-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
365-378
0.018
0
7mer
1581-1608
0.009
Not Conserved
6mer
1828-1841
0.006
3
7mer
1386-1410
0.006
0
XLOC_010894
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022350
Biotype: transcript isomorph
Gene id: XLOC_010894
Gene Name: XLOC_010894
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1241-1257
0.025
1
7mer
394-414
0.014
2
FGF14-IT1
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000607251
Biotype: sense_intronic
Gene id: ENSG00000243319
Gene Name: FGF14-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1539-1563
0.035
8
6mer
526-549
0.004
2
RP11-322L20.1
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557527
Biotype: lincRNA
Gene id: ENSG00000258804
Gene Name: RP11-322L20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1244-1260
0.025
1
7mer
397-417
0.014
2
XLOC_010778
hsa-miR-182-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022446
Biotype: transcript isomorph
Gene id: XLOC_010778
Gene Name: XLOC_010778
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
532-554
0.039
6
RP11-384P7.7
hsa-miR-182-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000566968
Biotype: lincRNA
Gene id: ENSG00000260947
Gene Name: RP11-384P7.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2341-2357
0.019
0
7mer
3514-3525
0.017
1
6mer
3074-3090
0.003
0
ZNRD1-AS1
hsa-miR-182-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000421692
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1467-1481
0.022
0
8mer
1066-1083
0.016
4
XLOC_005166
hsa-miR-182-5p
0.848
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011691
Biotype: transcript isomorph
Gene id: XLOC_005166
Gene Name: XLOC_005166
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
66-85
0.039
3
XLOC_008625
hsa-miR-182-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018344
Biotype: transcript isomorph
Gene id: XLOC_008625
Gene Name: XLOC_008625
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
273-288
0.019
2
7mer
87-100
0.015
3
6mer
145-165
0.005
2
RP1-232P20.1
hsa-miR-182-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000602674
Biotype: antisense
Gene id: ENSG00000269985
Gene Name: RP1-232P20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
990-1008
0.028
3
7mer
1226-1244
0.010
1
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