LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-182-5p


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Gene
miRNA
Score
DIANA Links
DLX6-AS1
hsa-miR-182-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000430027
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10262-10287
0.035
8
6mer
10719-10733
0.002
0
6mer
8761-8785
0.002
1
6mer
1568-1588
0.001
3
6mer
2869-2887
0.001
1
LINC01322
hsa-miR-182-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000494915
Biotype: lincRNA
Gene id: ENSG00000244128
Gene Name: LINC01322
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
365-379
0.031
6
6mer
279-302
0.006
5
6mer
471-490
0.005
3
RP11-231I16.1
hsa-miR-182-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548738
Biotype: antisense
Gene id: ENSG00000257279
Gene Name: RP11-231I16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2960-2972
0.014
5
8mer
3602-3628
0.013
2
7mer
4121-4144
0.009
0
6mer
1537-1552
0.006
12
RP11-4B14.3
hsa-miR-182-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000470817
Biotype: lincRNA
Gene id: ENSG00000239381
Gene Name: RP11-4B14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
427-448
0.042
13
XLOC_008116
hsa-miR-182-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017293
Biotype: transcript isomorph
Gene id: XLOC_008116
Gene Name: XLOC_008116
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
291-313
0.033
0
7mer
194-219
0.008
1
AP000688.29
hsa-miR-182-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000422473
Biotype: lincRNA
Gene id: ENSG00000233393
Gene Name: AP000688.29
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
710-727
0.034
0
6mer
975-999
0.007
0
AIRN
hsa-miR-182-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000601203
Biotype: antisense
Gene id: ENSG00000268257
Gene Name: AIRN
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
811-822
0.036
1
6mer
3544-3558
0.004
1
6mer
3228-3250
0.002
1
RP11-16N2.1
hsa-miR-182-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000398777
Biotype: lincRNA
Gene id: ENSG00000240152
Gene Name: RP11-16N2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
49-63
0.041
3
RP11-434H14.1
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000552220
Biotype: antisense
Gene id: ENSG00000257277
Gene Name: RP11-434H14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
217-229
0.014
1
7mer
467-485
0.011
Not Conserved
7mer
441-465
0.007
2
6mer
238-252
0.005
1
6mer
44-57
0.004
1
RP11-276H19.1
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000415801
Biotype: lincRNA
Gene id: ENSG00000226237
Gene Name: RP11-276H19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
656-671
0.041
1
NAPA-AS1
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593284
Biotype: antisense
Gene id: ENSG00000268061
Gene Name: NAPA-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1640-1664
0.038
1
6mer
1380-1398
0.002
Not Conserved
6mer
1314-1337
0.002
0
RP11-1134I14.8
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000528139
Biotype: lincRNA
Gene id: ENSG00000255366
Gene Name: RP11-1134I14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2043-2057
0.041
1
RP11-138A9.1
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000605249
Biotype: lincRNA
Gene id: ENSG00000271204
Gene Name: RP11-138A9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
664-678
0.015
7
7mer
546-568
0.014
6
7mer
67-91
0.012
1
RP11-4B14.3
hsa-miR-182-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000482559
Biotype: lincRNA
Gene id: ENSG00000239381
Gene Name: RP11-4B14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
424-448
0.041
13
LINC01018
hsa-miR-182-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513844
Biotype: lincRNA
Gene id: ENSG00000250056
Gene Name: LINC01018
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
481-498
0.041
1
RP11-4B14.3
hsa-miR-182-5p
0.862
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000481234
Biotype: lincRNA
Gene id: ENSG00000239381
Gene Name: RP11-4B14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
673-697
0.041
13
XLOC_011190
hsa-miR-182-5p
0.862
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023326
Biotype: transcript isomorph
Gene id: XLOC_011190
Gene Name: XLOC_011190
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1007-1022
0.030
2
6mer
2384-2407
0.005
0
6mer
1606-1621
0.003
0
6mer
1223-1241
0.003
0
RP11-206L10.9
hsa-miR-182-5p
0.861
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000586928
Biotype: lincRNA
Gene id: ENSG00000237491
Gene Name: RP11-206L10.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-347
0.041
Not Conserved
XLOC_001406
hsa-miR-182-5p
0.861
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003616
Biotype: transcript isomorph
Gene id: XLOC_001406
Gene Name: XLOC_001406
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1150-1176
0.024
5
6mer
3839-3862
0.006
5
6mer
3642-3657
0.005
3
6mer
2658-2682
0.002
1
6mer
508-523
0.002
1
6mer
1499-1516
0.002
0
LINC01099
hsa-miR-182-5p
0.861
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507011
Biotype: lincRNA
Gene id: ENSG00000251504
Gene Name: LINC01099
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
39-53
0.040
1
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