LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-182-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
TEX41
hsa-miR-182-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000596970
Biotype: lincRNA
Gene id: ENSG00000226674
Gene Name: TEX41
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
603-622
0.047
7
XLOC_001412
hsa-miR-182-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002863
Biotype: transcript isomorph
Gene id: XLOC_001412
Gene Name: XLOC_001412
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
213-234
0.040
4
7mer
2629-2644
0.004
1
6mer
3458-3480
0.003
2
LINC00964
hsa-miR-182-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000510897
Biotype: lincRNA
Gene id: ENSG00000249816
Gene Name: LINC00964
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
835-854
0.047
1
RP11-565F19.4
hsa-miR-182-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000576477
Biotype: antisense
Gene id: ENSG00000262815
Gene Name: RP11-565F19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
380-397
0.047
1
ST7-OT3
hsa-miR-182-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_002332.1
Biotype: sense
Gene id: NR_002332.1 (gene)
Gene Name: ST7-OT3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
425-450
0.040
12
6mer
300-318
0.007
12
FAM95B1
hsa-miR-182-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000610972
Biotype: lincRNA
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
73-97
0.046
0
RP11-240L7.4
hsa-miR-182-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000448857
Biotype: antisense
Gene id: ENSG00000232283
Gene Name: RP11-240L7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
353-378
0.043
3
6mer
119-146
0.004
2
LINC00475
hsa-miR-182-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000434944
Biotype: lincRNA
Gene id: ENSG00000225511
Gene Name: LINC00475
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20-36
0.046
0
PRICKLE2-AS1
hsa-miR-182-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000482609
Biotype: antisense
Gene id: ENSG00000241111
Gene Name: PRICKLE2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
389-407
0.018
9
7mer
6090-6107
0.009
1
6mer
37-60
0.006
4
6mer
160-178
0.005
6
7mer
5431-5454
0.005
0
6mer
1767-1791
0.003
9
AF064860.7
hsa-miR-182-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000457325
Biotype: lincRNA
Gene id: ENSG00000231713
Gene Name: AF064860.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Placenta Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1461-1487
0.043
0
6mer
298-314
0.003
Not Conserved
XLOC_001413
hsa-miR-182-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003623
Biotype: transcript isomorph
Gene id: XLOC_001413
Gene Name: XLOC_001413
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3527-3551
0.041
1
7mer
4153-4178
0.005
0
CTD-2203A3.1
hsa-miR-182-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505899
Biotype: lincRNA
Gene id: ENSG00000248789
Gene Name: CTD-2203A3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
354-366
0.046
12
RP11-475O6.1
hsa-miR-182-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000457273
Biotype: lincRNA
Gene id: ENSG00000233008
Gene Name: RP11-475O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
198-216
0.031
5
7mer
433-447
0.015
3
RP11-574O7.1
hsa-miR-182-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518927
Biotype: antisense
Gene id: ENSG00000254041
Gene Name: RP11-574O7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
39-58
0.026
6
7mer
161-186
0.020
5
AP000462.1
hsa-miR-182-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000540545
Biotype: antisense
Gene id: ENSG00000256315
Gene Name: AP000462.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
303-324
0.046
8
XLOC_013108
hsa-miR-182-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027066
Biotype: transcript isomorph
Gene id: XLOC_013108
Gene Name: XLOC_013108
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
863-886
0.040
1
6mer
572-590
0.006
4
RP11-566K11.7
hsa-miR-182-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570217
Biotype: retained_intron
Gene id: ENSG00000267048
Gene Name: RP11-566K11.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-187
0.046
8
RP11-455P21.3
hsa-miR-182-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000495684
Biotype: lincRNA
Gene id: ENSG00000278610
Gene Name: RP11-455P21.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
170-188
0.036
2
6mer
424-441
0.010
8
FAM95B1
hsa-miR-182-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000592053
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
72-96
0.046
0
RP11-16N2.1
hsa-miR-182-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506379
Biotype: lincRNA
Gene id: ENSG00000240152
Gene Name: RP11-16N2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
50-64
0.041
3
6mer
157-173
0.005
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept