LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
AC009299.2
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000610254
Biotype: antisense
Gene id: ENSG00000235724
Gene Name: AC009299.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
166-182
0.025
9
XLOC_005539
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012016
Biotype: transcript isomorph
Gene id: XLOC_005539
Gene Name: XLOC_005539
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4325-4347
0.015
1
6mer
4483-4505
0.008
1
6mer
3248-3269
0.002
0
XLOC_011170
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023301
Biotype: transcript isomorph
Gene id: XLOC_011170
Gene Name: XLOC_011170
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
261-285
0.019
0
6mer
275-297
0.005
1
AC009133.21
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000619159
Biotype: antisense
Gene id: ENSG00000275857
Gene Name: AC009133.21
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
119-137
0.025
1
RP13-216E22.4
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000444482
Biotype: lincRNA
Gene id: ENSG00000228906
Gene Name: RP13-216E22.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
419-446
0.025
0
CTB-160O22.1
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000517511
Biotype: sense_intronic
Gene id: ENSG00000253297
Gene Name: CTB-160O22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1430-1449
0.013
1
6mer
1378-1399
0.009
6
6mer
231-255
0.003
0
CCNT2-AS1
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_036549.1
Biotype: antisense
Gene id: NR_036549.1 (gene)
Gene Name: CCNT2-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
226-239
0.016
4
6mer
14-40
0.005
1
6mer
647-660
0.004
2
LINC00384
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000437721
Biotype: lincRNA
Gene id: ENSG00000232117
Gene Name: LINC00384
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
337-355
0.010
1
8mer
5860-5876
0.007
1
8mer
4529-4554
0.004
1
6mer
3916-3942
0.002
0
6mer
5586-5610
0.002
1
XLOC_006364
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013714
Biotype: transcript isomorph
Gene id: XLOC_006364
Gene Name: XLOC_006364
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
478-501
0.016
4
6mer
1229-1252
0.005
3
6mer
1448-1474
0.004
0
CASC15
hsa-miR-181a-5p
0.700
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606197
Biotype: lincRNA
Gene id: ENSG00000272168
Gene Name: CASC15
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3673-3691
0.020
1
6mer
2492-2508
0.003
3
6mer
1770-1793
0.002
1
XLOC_008186
hsa-miR-181a-5p
0.700
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017518
Biotype: transcript isomorph
Gene id: XLOC_008186
Gene Name: XLOC_008186
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
83-109
0.014
3
6mer
13-38
0.008
1
6mer
1159-1179
0.002
Not Conserved
DSCAM-AS1
hsa-miR-181a-5p
0.700
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000422749
Biotype: antisense
Gene id: ENSG00000235123
Gene Name: DSCAM-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1110-1135
0.025
1
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