LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
FMR1-AS1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000594922
Biotype: antisense
Gene id: ENSG00000268066
Gene Name: FMR1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
299-324
0.015
3
6mer
191-203
0.005
3
6mer
526-543
0.004
2
FMR1-AS1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000601841
Biotype: retained_intron
Gene id: ENSG00000268066
Gene Name: FMR1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
299-324
0.015
3
6mer
191-203
0.005
3
6mer
526-543
0.005
2
AC004947.2
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000457000
Biotype: lincRNA
Gene id: ENSG00000233760
Gene Name: AC004947.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
187-204
0.025
1
XLOC_006941
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014872
Biotype: transcript isomorph
Gene id: XLOC_006941
Gene Name: XLOC_006941
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
470-492
0.017
3
7mer
2482-2506
0.008
1
RP11-95M5.1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000566553
Biotype: lincRNA
Gene id: ENSG00000260902
Gene Name: RP11-95M5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
310-324
0.009
1
6mer
59-79
0.006
1
6mer
612-628
0.003
1
6mer
457-478
0.003
1
6mer
2071-2098
0.002
0
6mer
2223-2236
0.001
0
ROR1-AS1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000412349
Biotype: antisense
Gene id: ENSG00000223949
Gene Name: ROR1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
585-611
0.018
1
6mer
1314-1333
0.007
2
RP11-513N24.1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000568767
Biotype: lincRNA
Gene id: ENSG00000260695
Gene Name: RP11-513N24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
24-43
0.018
8
6mer
13-38
0.007
1
AC008060.7
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000401499
Biotype: lincRNA
Gene id: ENSG00000218672
Gene Name: AC008060.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
970-989
0.018
0
6mer
8-33
0.007
0
RP11-554D20.2
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000616822
Biotype: sense_intronic
Gene id: ENSG00000273792
Gene Name: RP11-554D20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1215-1233
0.019
1
6mer
1238-1248
0.005
1
AC079117.1
hsa-miR-181a-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_110284.1
Biotype: antisense
Gene id: NR_110284.1 (gene)
Gene Name: AC079117.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
333-359
0.025
5
RP11-770J1.5
hsa-miR-181a-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000534438
Biotype: antisense
Gene id: ENSG00000254873
Gene Name: RP11-770J1.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
203-217
0.025
11
RP11-247C2.2
hsa-miR-181a-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000514871
Biotype: lincRNA
Gene id: ENSG00000248540
Gene Name: RP11-247C2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
857-876
0.018
0
6mer
1752-1777
0.004
3
6mer
520-538
0.003
Not Conserved
XLOC_003701
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008259
Biotype: transcript isomorph
Gene id: XLOC_003701
Gene Name: XLOC_003701
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
159-173
0.025
0
LINC01278
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000608788
Biotype: sense_overlapping
Gene id: ENSG00000235437
Gene Name: LINC01278
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
91-108
0.025
Not Conserved
RP11-104J23.1
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000617328
Biotype: antisense
Gene id: ENSG00000275944
Gene Name: RP11-104J23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1611-1628
0.018
1
6mer
1480-1497
0.007
0
RP6-159A1.3
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000424241
Biotype: antisense
Gene id: ENSG00000237311
Gene Name: RP6-159A1.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
781-802
0.025
2
LINC00597
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_026813.1
Biotype: sense
Gene id: NR_026813.1 (gene)
Gene Name: LINC00597
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
364-388
0.013
0
7mer
355-374
0.012
3
AC079117.1
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445178
Biotype: antisense
Gene id: ENSG00000234653
Gene Name: AC079117.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
333-359
0.025
5
SLC25A5-AS1
hsa-miR-181a-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000395539
Biotype: retained_intron
Gene id: ENSG00000224281
Gene Name: SLC25A5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
147-171
0.019
1
6mer
1206-1228
0.003
1
6mer
1845-1863
0.002
Not Conserved
RP11-463H12.2
hsa-miR-181a-5p
0.701
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000509711
Biotype: lincRNA
Gene id: ENSG00000248317
Gene Name: RP11-463H12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
103-123
0.025
0
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