LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
MAGI2-AS3
hsa-miR-181a-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000621901
Biotype: antisense
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
397-419
0.020
0
6mer
373-388
0.005
1
RP11-96H17.1
hsa-miR-181a-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563003
Biotype: lincRNA
Gene id: ENSG00000261502
Gene Name: RP11-96H17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1986-1993
0.010
0
7mer
1171-1181
0.010
3
6mer
252-265
0.005
1
XLOC_012528
hsa-miR-181a-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025700
Biotype: transcript isomorph
Gene id: XLOC_012528
Gene Name: XLOC_012528
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
79-93
0.015
8
7mer
185-204
0.010
4
XLOC_007189
hsa-miR-181a-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015145
Biotype: transcript isomorph
Gene id: XLOC_007189
Gene Name: XLOC_007189
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
139-160
0.025
0
AC004158.3
hsa-miR-181a-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564508
Biotype: lincRNA
Gene id: ENSG00000260664
Gene Name: AC004158.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4242-4266
0.016
4
6mer
3462-3478
0.005
10
6mer
3048-3062
0.004
6
XLOC_004850
hsa-miR-181a-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010941
Biotype: transcript isomorph
Gene id: XLOC_004850
Gene Name: XLOC_004850
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1515-1531
0.021
1
6mer
655-677
0.004
3
RP11-799D4.4
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000590478
Biotype: antisense
Gene id: ENSG00000266947
Gene Name: RP11-799D4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
8-27
0.011
1
6mer
91-107
0.008
1
7mer
2242-2264
0.006
1
AC019186.1
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000447019
Biotype: lincRNA
Gene id: ENSG00000234584
Gene Name: AC019186.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
219-244
0.012
1
6mer
494-509
0.007
5
7mer
153-169
0.006
0
XLOC_012444
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025612
Biotype: transcript isomorph
Gene id: XLOC_012444
Gene Name: XLOC_012444
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
8-27
0.010
1
6mer
91-107
0.008
1
7mer
2258-2280
0.007
1
LINC01514
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000434189
Biotype: lincRNA
Gene id: ENSG00000237579
Gene Name: LINC01514
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1276-1297
0.025
2
LOC101928882
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_109986.1
Biotype: sense
Gene id: NR_109986.1 (gene)
Gene Name: LOC101928882
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2445-2465
0.011
1
6mer
40-64
0.010
4
6mer
719-741
0.004
1
RP11-423P10.2
hsa-miR-181a-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000606229
Biotype: sense_intronic
Gene id: ENSG00000272054
Gene Name: RP11-423P10.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2989-3011
0.016
8
7mer
2489-2514
0.003
2
6mer
3631-3650
0.003
Not Conserved
6mer
1290-1309
0.002
1
RP11-556E13.1
hsa-miR-181a-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000443523
Biotype: antisense
Gene id: ENSG00000228651
Gene Name: RP11-556E13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
262-282
0.025
3
LINC01511
hsa-miR-181a-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000523692
Biotype: lincRNA
Gene id: ENSG00000250584
Gene Name: LINC01511
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
418-441
0.016
0
7mer
47-72
0.009
0
AC008103.4
hsa-miR-181a-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623570
Biotype: sense_intronic
Gene id: ENSG00000279987
Gene Name: AC008103.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
706-730
0.025
1
RP11-449L23.2
hsa-miR-181a-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583547
Biotype: antisense
Gene id: ENSG00000264985
Gene Name: RP11-449L23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2168-2184
0.016
2
6mer
2234-2260
0.005
0
6mer
793-811
0.003
2
6mer
1356-1380
0.002
Not Conserved
WT1-AS
hsa-miR-181a-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000525436
Biotype: antisense
Gene id: ENSG00000183242
Gene Name: WT1-AS
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
969-986
0.014
9
6mer
946-963
0.011
10
RP11-794P6.1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528614
Biotype: sense_intronic
Gene id: ENSG00000255428
Gene Name: RP11-794P6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
787-806
0.023
2
6mer
1605-1626
0.002
0
PCAT29
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558411
Biotype: lincRNA
Gene id: ENSG00000259641
Gene Name: PCAT29
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
611-631
0.008
0
7mer
1039-1062
0.007
3
6mer
1502-1526
0.004
2
6mer
405-418
0.004
1
6mer
447-469
0.003
1
SLC25A5-AS1
hsa-miR-181a-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000446986
Biotype: lincRNA
Gene id: ENSG00000224281
Gene Name: SLC25A5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
147-171
0.020
1
6mer
1206-1228
0.005
1
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