LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
XLOC_001062
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001704
Biotype: transcript isomorph
Gene id: XLOC_001062
Gene Name: XLOC_001062
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
83-99
0.021
0
6mer
98-117
0.005
1
RP11-964E11.2
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555107
Biotype: antisense
Gene id: ENSG00000258661
Gene Name: RP11-964E11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1756-1782
0.015
0
6mer
2244-2271
0.010
8
RP11-204P2.3
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000458017
Biotype: antisense
Gene id: ENSG00000235399
Gene Name: RP11-204P2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
314-336
0.026
0
RP11-622C24.2
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000617013
Biotype: lincRNA
Gene id: ENSG00000277152
Gene Name: RP11-622C24.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
156-182
0.019
0
7mer
285-308
0.004
0
6mer
1669-1685
0.002
1
6mer
5682-5703
0.001
Not Conserved
RP11-615J4.3
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000497896
Biotype: lincRNA
Gene id: ENSG00000239311
Gene Name: RP11-615J4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
120-136
0.026
1
AC005037.3
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413848
Biotype: antisense
Gene id: ENSG00000183308
Gene Name: AC005037.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
357-375
0.026
8
LINC-PINT
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000433079
Biotype: antisense
Gene id: ENSG00000231721
Gene Name: LINC-PINT
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
320-334
0.012
1
6mer
142-154
0.008
1
6mer
415-432
0.006
2
RP11-504A18.1
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000569425
Biotype: lincRNA
Gene id: ENSG00000260971
Gene Name: RP11-504A18.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1053-1070
0.023
0
6mer
611-635
0.003
1
CTD-2547G23.4
hsa-miR-181a-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000612792
Biotype: lincRNA
Gene id: ENSG00000274925
Gene Name: CTD-2547G23.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2955-2975
0.010
0
7mer
2680-2703
0.010
0
6mer
1225-1251
0.002
1
6mer
2217-2241
0.002
0
6mer
1465-1487
0.002
1
RP5-899B16.2
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000445585
Biotype: lincRNA
Gene id: ENSG00000225148
Gene Name: RP5-899B16.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
465-490
0.019
1
6mer
732-747
0.006
3
HYMAI
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_002768.1
Biotype: sense
Gene id: NR_002768.1 (gene)
Gene Name: HYMAI
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2594-2612
0.008
0
6mer
78-102
0.008
1
6mer
804-830
0.004
0
6mer
2440-2454
0.002
2
6mer
3461-3484
0.002
1
6mer
3293-3313
0.002
1
XLOC_002452
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004544
Biotype: transcript isomorph
Gene id: XLOC_002452
Gene Name: XLOC_002452
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
655-677
0.011
1
7mer
315-340
0.010
1
7mer
1451-1473
0.003
1
6mer
516-532
0.002
Not Conserved
RP11-562L8.1
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000548306
Biotype: lincRNA
Gene id: ENSG00000257522
Gene Name: RP11-562L8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
488-507
0.026
2
LINC01105
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000625018
Biotype: TEC
Gene id: ENSG00000232044
Gene Name: LINC01105
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3179-3199
0.018
1
6mer
323-342
0.003
1
6mer
2173-2188
0.002
1
6mer
1646-1671
0.002
3
RP11-385N23.1
hsa-miR-181a-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000414631
Biotype: antisense
Gene id: ENSG00000230121
Gene Name: RP11-385N23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
648-667
0.026
2
OIP5-AS1
hsa-miR-181a-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000557993
Biotype: antisense
Gene id: ENSG00000247556
Gene Name: OIP5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1374-1392
0.026
2
XLOC_000294
hsa-miR-181a-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001027
Biotype: transcript isomorph
Gene id: XLOC_000294
Gene Name: XLOC_000294
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9249-9270
0.011
2
6mer
8880-8899
0.004
2
6mer
6183-6208
0.003
3
6mer
1883-1899
0.002
2
6mer
7315-7337
0.002
3
6mer
2325-2346
0.002
1
6mer
5591-5608
0.001
3
MIR99AHG
hsa-miR-181a-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000619222
Biotype: lincRNA
Gene id: ENSG00000215386
Gene Name: MIR99AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
932-956
0.016
2
7mer
1804-1823
0.004
1
6mer
2179-2200
0.003
2
6mer
2546-2566
0.002
1
AC002519.8
hsa-miR-181a-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570073
Biotype: sense_intronic
Gene id: ENSG00000259810
Gene Name: AC002519.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2475-2499
0.019
1
6mer
395-422
0.007
0
XLOC_004269
hsa-miR-181a-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009233
Biotype: transcript isomorph
Gene id: XLOC_004269
Gene Name: XLOC_004269
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1955-1974
0.016
1
7mer
1780-1804
0.007
1
6mer
22-37
0.003
0
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