LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
FZD10-AS1
hsa-miR-181a-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505807
Biotype: lincRNA
Gene id: ENSG00000250208
Gene Name: FZD10-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3867-3890
0.010
2
6mer
12-32
0.008
1
6mer
249-271
0.003
1
6mer
2553-2578
0.003
2
6mer
4454-4477
0.002
Not Conserved
6mer
6856-6870
0.001
0
XLOC_010834
hsa-miR-181a-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022511
Biotype: transcript isomorph
Gene id: XLOC_010834
Gene Name: XLOC_010834
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
367-391
0.027
1
RP5-842K16.1
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000461145
Biotype: lincRNA
Gene id: ENSG00000204990
Gene Name: RP5-842K16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
174-201
0.014
6
6mer
408-425
0.009
4
6mer
1312-1337
0.004
1
RP11-1275H24.2
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000609130
Biotype: lincRNA
Gene id: ENSG00000272953
Gene Name: RP11-1275H24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
501-523
0.017
7
7mer
384-408
0.010
1
XLOC_012608
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026232
Biotype: transcript isomorph
Gene id: XLOC_012608
Gene Name: XLOC_012608
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
180-200
0.021
0
6mer
110-131
0.006
3
KB-1183D5.13
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000436681
Biotype: lincRNA
Gene id: ENSG00000206142
Gene Name: KB-1183D5.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3666-3684
0.018
1
8mer
224-248
0.009
0
XLOC_010920
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022618
Biotype: transcript isomorph
Gene id: XLOC_010920
Gene Name: XLOC_010920
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2795-2808
0.027
1
XLOC_013466
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028112
Biotype: transcript isomorph
Gene id: XLOC_013466
Gene Name: XLOC_013466
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
428-454
0.019
1
8mer
1182-1198
0.007
0
XLOC_010142
hsa-miR-181a-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020859
Biotype: transcript isomorph
Gene id: XLOC_010142
Gene Name: XLOC_010142
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
339-362
0.010
0
6mer
49-72
0.009
4
6mer
2147-2174
0.005
1
6mer
1503-1523
0.003
3
RP11-544A12.8
hsa-miR-181a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000502188
Biotype: antisense
Gene id: ENSG00000246851
Gene Name: RP11-544A12.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2730-2754
0.024
1
6mer
2084-2104
0.003
2
RP11-1057B8.2
hsa-miR-181a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000505083
Biotype: lincRNA
Gene id: ENSG00000251218
Gene Name: RP11-1057B8.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1461-1486
0.009
2
6mer
1982-2001
0.008
3
7mer
299-316
0.007
0
6mer
1537-1555
0.003
2
XLOC_009507
hsa-miR-181a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019712
Biotype: transcript isomorph
Gene id: XLOC_009507
Gene Name: XLOC_009507
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
120-137
0.014
0
7mer
138-154
0.013
2
KLHL7-AS1
hsa-miR-181a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000419813
Biotype: lincRNA
Gene id: ENSG00000230658
Gene Name: KLHL7-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1612-1633
0.008
0
8mer
2090-2112
0.006
1
6mer
183-200
0.005
0
6mer
2152-2177
0.004
1
6mer
714-729
0.003
1
6mer
1580-1604
0.002
0
MIR133A1HG
hsa-miR-181a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581613
Biotype: antisense
Gene id: ENSG00000265142
Gene Name: MIR133A1HG
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-85
0.022
4
6mer
189-210
0.005
2
XLOC_005155
hsa-miR-181a-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011675
Biotype: transcript isomorph
Gene id: XLOC_005155
Gene Name: XLOC_005155
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
100-118
0.023
0
6mer
88-112
0.004
0
RP4-625H18.2
hsa-miR-181a-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607810
Biotype: lincRNA
Gene id: ENSG00000228412
Gene Name: RP4-625H18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
595-610
0.014
Not Conserved
7mer
273-287
0.010
1
6mer
1202-1218
0.003
1
AC004947.2
hsa-miR-181a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000430426
Biotype: lincRNA
Gene id: ENSG00000233760
Gene Name: AC004947.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
130-147
0.027
1
DYNLL1-AS1
hsa-miR-181a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500741
Biotype: antisense
Gene id: ENSG00000248008
Gene Name: DYNLL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
266-279
0.022
2
6mer
595-607
0.002
1
6mer
339-358
0.002
0
TMX2-CTNND1
hsa-miR-181a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_037646.1
Biotype: sense
Gene id: NR_037646.1 (gene)
Gene Name: TMX2-CTNND1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5709-5735
0.013
1
6mer
2145-2168
0.005
11
6mer
5979-6000
0.002
2
6mer
4246-4269
0.002
8
6mer
4168-4186
0.002
6
6mer
2189-2211
0.001
9
6mer
2356-2379
0.001
2
XLOC_007831
hsa-miR-181a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016466
Biotype: transcript isomorph
Gene id: XLOC_007831
Gene Name: XLOC_007831
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
378-396
0.022
1
6mer
367-387
0.005
1
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