LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
RP11-64D24.4
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000534904
Biotype: antisense
Gene id: ENSG00000256195
Gene Name: RP11-64D24.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
268-292
0.005
0
6mer
406-424
0.005
1
6mer
570-593
0.004
0
6mer
970-984
0.003
1
6mer
327-353
0.003
0
6mer
3216-3239
0.003
2
6mer
2162-2179
0.003
1
6mer
3162-3181
0.002
1
XLOC_005559
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012631
Biotype: transcript isomorph
Gene id: XLOC_005559
Gene Name: XLOC_005559
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3854-3875
0.014
1
7mer
263-283
0.009
1
6mer
3880-3903
0.005
1
CTA-254O6.1
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000561473
Biotype: lincRNA
Gene id: ENSG00000261462
Gene Name: CTA-254O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1538-1561
0.025
4
6mer
774-799
0.003
0
CTD-3076O17.2
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559400
Biotype: antisense
Gene id: ENSG00000259219
Gene Name: CTD-3076O17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1421-1439
0.018
0
7mer
1452-1467
0.010
3
LINC00960
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000492922
Biotype: lincRNA
Gene id: ENSG00000242516
Gene Name: LINC00960
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
316-338
0.019
1
6mer
782-806
0.008
1
AP000235.2
hsa-miR-181a-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000441009
Biotype: lincRNA
Gene id: ENSG00000226983
Gene Name: AP000235.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1106-1131
0.015
1
6mer
2101-2122
0.010
5
6mer
1313-1335
0.002
0
XLOC_011384
hsa-miR-181a-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023557
Biotype: transcript isomorph
Gene id: XLOC_011384
Gene Name: XLOC_011384
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3193-3215
0.009
1
7mer
381-400
0.007
0
8mer
2573-2588
0.007
1
6mer
459-478
0.004
0
CTD-2291D10.2
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000565584
Biotype: lincRNA
Gene id: ENSG00000261558
Gene Name: CTD-2291D10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
117-142
0.016
0
6mer
618-641
0.012
0
RP11-152O14.1
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566439
Biotype: lincRNA
Gene id: ENSG00000261749
Gene Name: RP11-152O14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
876-895
0.018
3
6mer
120-145
0.009
4
IFNG-AS1
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541715
Biotype: antisense
Gene id: ENSG00000255733
Gene Name: IFNG-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
798-821
0.028
1
AF121898.3
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517711
Biotype: antisense
Gene id: ENSG00000253500
Gene Name: AF121898.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
809-830
0.022
0
6mer
786-803
0.006
2
LINC01314
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560778
Biotype: lincRNA
Gene id: ENSG00000259417
Gene Name: LINC01314
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
295-308
0.014
1
8mer
4771-4789
0.006
0
7mer
5092-5113
0.005
0
6mer
3778-3799
0.002
1
7mer
4288-4311
0.001
0
RP4-760C5.5
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000449316
Biotype: lincRNA
Gene id: ENSG00000226203
Gene Name: RP4-760C5.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4366-4383
0.014
0
6mer
265-286
0.009
0
6mer
1052-1071
0.004
0
EIF3J-AS1
hsa-miR-181a-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_034170.1
Biotype: lincRNA
Gene id: NR_034170.1 (gene)
Gene Name: EIF3J-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1150-1170
0.023
1
6mer
537-557
0.004
1
XLOC_008585
hsa-miR-181a-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018799
Biotype: transcript isomorph
Gene id: XLOC_008585
Gene Name: XLOC_008585
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1194-1215
0.027
2
XLOC_006110
hsa-miR-181a-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013453
Biotype: transcript isomorph
Gene id: XLOC_006110
Gene Name: XLOC_006110
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
393-413
0.018
1
6mer
10-29
0.009
0
XLOC_001751
hsa-miR-181a-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003048
Biotype: transcript isomorph
Gene id: XLOC_001751
Gene Name: XLOC_001751
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1673-1689
0.027
0
RP11-1151B14.5
hsa-miR-181a-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000610389
Biotype: sense_intronic
Gene id: ENSG00000274354
Gene Name: RP11-1151B14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
61-85
0.016
0
6mer
12-16
0.007
0
6mer
360-378
0.004
0
RP5-978I12.1
hsa-miR-181a-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000562268
Biotype: lincRNA
Gene id: ENSG00000260951
Gene Name: RP5-978I12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
501-523
0.015
1
7mer
266-290
0.007
1
7mer
1123-1143
0.005
2
RP11-175O19.4
hsa-miR-181a-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000421806
Biotype: antisense
Gene id: ENSG00000231025
Gene Name: RP11-175O19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
3071-3096
0.012
9
7mer
864-890
0.009
6
6mer
1016-1036
0.003
5
6mer
1036-1052
0.003
6
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