LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
XLOC_012055
hsa-miR-181a-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024779
Biotype: transcript isomorph
Gene id: XLOC_012055
Gene Name: XLOC_012055
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
457-463
0.021
1
7mer
184-206
0.007
0
XLOC_012048
hsa-miR-181a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00025089
Biotype: transcript isomorph
Gene id: XLOC_012048
Gene Name: XLOC_012048
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
698-711
0.028
1
MIR29B1
hsa-miR-181a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000432045
Biotype: lincRNA
Gene id: ENSG00000226380
Gene Name: MIR29B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
182-205
0.015
1
7mer
6138-6159
0.008
2
7mer
2300-2320
0.004
0
6mer
4471-4495
0.002
4
XLOC_008522
hsa-miR-181a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018246
Biotype: transcript isomorph
Gene id: XLOC_008522
Gene Name: XLOC_008522
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
155-179
0.012
9
8mer
1799-1813
0.006
0
6mer
2085-2099
0.004
7
6mer
991-1012
0.003
2
7mer
2405-2428
0.002
0
6mer
2191-2214
0.000
Not Conserved
RP11-517B11.7
hsa-miR-181a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000565095
Biotype: sense_overlapping
Gene id: ENSG00000261167
Gene Name: RP11-517B11.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2384-2402
0.006
1
6mer
131-156
0.006
2
6mer
3311-3332
0.006
1
6mer
48-72
0.006
0
6mer
307-333
0.005
1
RP11-982M15.6
hsa-miR-181a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000540171
Biotype: lincRNA
Gene id: ENSG00000256050
Gene Name: RP11-982M15.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1026-1043
0.028
1
MAGI2-AS3
hsa-miR-181a-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000612949
Biotype: retained_intron
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
292-314
0.023
0
6mer
268-283
0.005
1
RP11-483C6.1
hsa-miR-181a-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000572358
Biotype: sense_intronic
Gene id: ENSG00000262119
Gene Name: RP11-483C6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1610-1624
0.015
2
6mer
167-190
0.007
1
6mer
286-309
0.006
2
RP11-403A3.1
hsa-miR-181a-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000618896
Biotype: lincRNA
Gene id: ENSG00000274331
Gene Name: RP11-403A3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
181-194
0.015
1
8mer
1661-1683
0.013
0
XLOC_012288
hsa-miR-181a-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025471
Biotype: transcript isomorph
Gene id: XLOC_012288
Gene Name: XLOC_012288
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2984-3002
0.023
0
6mer
842-855
0.003
0
6mer
2183-2208
0.002
0
AC139099.5
hsa-miR-181a-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000574098
Biotype: lincRNA
Gene id: ENSG00000262094
Gene Name: AC139099.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2281-2304
0.010
2
7mer
302-319
0.009
0
6mer
2166-2176
0.006
1
6mer
1389-1409
0.002
0
LOC102467079
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: NR_104655.1
Biotype: lincRNA
Gene id: NR_104655.1 (gene)
Gene Name: LOC102467079
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
875-894
0.019
3
6mer
119-144
0.009
4
RP11-127B20.3
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609575
Biotype: antisense
Gene id: ENSG00000272677
Gene Name: RP11-127B20.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
493-518
0.028
3
FLJ38122
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000422894
Biotype: lincRNA
Gene id: ENSG00000227508
Gene Name: FLJ38122
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
115-137
0.021
2
6mer
158-169
0.006
2
RP11-348F1.2
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000418775
Biotype: lincRNA
Gene id: ENSG00000226530
Gene Name: RP11-348F1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
520-538
0.023
0
6mer
409-434
0.005
1
RP11-973N13.4
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554918
Biotype: antisense
Gene id: ENSG00000259116
Gene Name: RP11-973N13.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
46-63
0.028
0
RP11-669C19.1
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000566804
Biotype: lincRNA
Gene id: ENSG00000261734
Gene Name: RP11-669C19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
242-261
0.012
1
7mer
1000-1025
0.010
2
6mer
750-772
0.005
4
TRHDE-AS1
hsa-miR-181a-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000426250
Biotype: antisense
Gene id: ENSG00000236333
Gene Name: TRHDE-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1422-1433
0.011
3
7mer
46-67
0.008
0
7mer
1297-1322
0.005
5
6mer
1891-1906
0.003
5
6mer
2387-2412
0.001
1
XXbac-BPG181B23.7
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606743
Biotype: lincRNA
Gene id: ENSG00000272221
Gene Name: XXbac-BPG181B23.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
47-60
0.011
1
6mer
192-210
0.009
1
6mer
163-179
0.008
1
ATP1A1-AS1
hsa-miR-181a-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000493908
Biotype: processed_transcript
Gene id: ENSG00000203865
Gene Name: ATP1A1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
27-43
0.023
10
6mer
272-294
0.005
0
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