LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
RP11-262A12.1
hsa-miR-181a-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000534252
Biotype: lincRNA
Gene id: ENSG00000254659
Gene Name: RP11-262A12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
528-542
0.020
1
7mer
108-125
0.009
1
TRAF3IP2-AS1
hsa-miR-181a-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000440001
Biotype: antisense
Gene id: ENSG00000231889
Gene Name: TRAF3IP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
845-859
0.019
1
6mer
685-709
0.010
7
CTD-2076M15.1
hsa-miR-181a-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000561587
Biotype: lincRNA
Gene id: ENSG00000260683
Gene Name: CTD-2076M15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
591-614
0.015
1
7mer
1324-1344
0.014
0
SNHG18
hsa-miR-181a-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508179
Biotype: lincRNA
Gene id: ENSG00000250786
Gene Name: SNHG18
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1718-1744
0.028
1
LINC00702
hsa-miR-181a-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608792
Biotype: lincRNA
Gene id: ENSG00000233117
Gene Name: LINC00702
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
214-238
0.012
0
8mer
644-663
0.007
Not Conserved
7mer
5781-5801
0.006
0
6mer
5653-5669
0.003
0
TRAF3IP2-AS1
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000525151
Biotype: antisense
Gene id: ENSG00000231889
Gene Name: TRAF3IP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
542-556
0.019
1
6mer
382-406
0.010
7
CTD-2636A23.2
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000565748
Biotype: antisense
Gene id: ENSG00000261604
Gene Name: CTD-2636A23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2043-2057
0.020
1
6mer
1640-1662
0.008
6
RP11-166D19.1
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000530955
Biotype: sense_overlapping
Gene id: ENSG00000255248
Gene Name: RP11-166D19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
85-99
0.024
2
6mer
168-185
0.004
1
AC144835.1
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000554798
Biotype: lincRNA
Gene id: ENSG00000258483
Gene Name: AC144835.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1086-1108
0.023
1
6mer
224-250
0.006
2
RP11-658F2.8
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000550837
Biotype: antisense
Gene id: ENSG00000258297
Gene Name: RP11-658F2.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2310-2332
0.013
2
6mer
2252-2274
0.009
5
6mer
2272-2290
0.006
1
EIF3J-AS1
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560750
Biotype: lincRNA
Gene id: ENSG00000179523
Gene Name: EIF3J-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
675-695
0.028
1
CTD-2349P21.5
hsa-miR-181a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000581019
Biotype: lincRNA
Gene id: ENSG00000263603
Gene Name: CTD-2349P21.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
231-253
0.018
0
7mer
221-246
0.010
0
XLOC_011753
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024436
Biotype: transcript isomorph
Gene id: XLOC_011753
Gene Name: XLOC_011753
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6322-6344
0.010
0
6mer
6203-6220
0.004
3
7mer
5735-5755
0.003
1
6mer
4476-4487
0.003
3
6mer
1089-1114
0.003
0
6mer
4015-4041
0.002
4
6mer
5510-5533
0.002
1
7mer
4190-4209
0.001
Not Conserved
6mer
4539-4556
0.001
1
AC074286.1
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000430416
Biotype: sense_overlapping
Gene id: ENSG00000213963
Gene Name: AC074286.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
375-398
0.019
1
7mer
575-595
0.009
1
RP11-122L9.1
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000618284
Biotype: lincRNA
Gene id: ENSG00000277930
Gene Name: RP11-122L9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
199-217
0.028
1
ALMS1-IT1
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000441587
Biotype: sense_intronic
Gene id: ENSG00000230002
Gene Name: ALMS1-IT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1601-1620
0.028
1
LINC00692
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000496997
Biotype: processed_transcript
Gene id: ENSG00000230891
Gene Name: LINC00692
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
203-221
0.028
1
RP11-38H17.1
hsa-miR-181a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518706
Biotype: lincRNA
Gene id: ENSG00000254366
Gene Name: RP11-38H17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
482-501
0.023
3
6mer
514-541
0.005
1
RP4-736H5.3
hsa-miR-181a-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000420758
Biotype: lincRNA
Gene id: ENSG00000233423
Gene Name: RP4-736H5.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
349-368
0.023
1
6mer
31-51
0.005
0
XLOC_009537
hsa-miR-181a-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00020124
Biotype: transcript isomorph
Gene id: XLOC_009537
Gene Name: XLOC_009537
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Colon Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
214-239
0.017
1
6mer
101-124
0.007
3
6mer
1046-1062
0.004
1
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