LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
TRHDE-AS1
hsa-miR-181a-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_026836.1
Biotype: antisense
Gene id: NR_026836.1 (gene)
Gene Name: TRHDE-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1422-1433
0.011
3
7mer
46-67
0.008
0
7mer
1297-1322
0.005
5
6mer
1891-1906
0.003
5
6mer
2387-2412
0.002
1
RP11-417B4.2
hsa-miR-181a-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000423942
Biotype: antisense
Gene id: ENSG00000230826
Gene Name: RP11-417B4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
61-86
0.029
2
RP11-1028N23.2
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548457
Biotype: lincRNA
Gene id: ENSG00000258280
Gene Name: RP11-1028N23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
155-182
0.023
0
6mer
137-152
0.006
1
AC007040.6
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000416229
Biotype: antisense
Gene id: ENSG00000228384
Gene Name: AC007040.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
345-356
0.029
1
RP11-387M24.5
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606123
Biotype: antisense
Gene id: ENSG00000272170
Gene Name: RP11-387M24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
343-367
0.029
7
RP11-46H11.3
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000503695
Biotype: lincRNA
Gene id: ENSG00000250790
Gene Name: RP11-46H11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
3018-3037
0.016
0
6mer
2611-2626
0.013
0
XLOC_006865
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014790
Biotype: transcript isomorph
Gene id: XLOC_006865
Gene Name: XLOC_006865
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
66-82
0.029
1
RP11-9E17.1
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000620414
Biotype: sense_intronic
Gene id: ENSG00000277534
Gene Name: RP11-9E17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
228-252
0.009
3
7mer
898-923
0.007
1
6mer
2308-2331
0.005
4
6mer
182-207
0.004
0
6mer
1299-1314
0.002
1
6mer
1440-1467
0.001
0
LINC01103
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000430551
Biotype: lincRNA
Gene id: ENSG00000234781
Gene Name: LINC01103
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1280-1299
0.021
0
6mer
1127-1146
0.008
3
RP11-744K17.1
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000562182
Biotype: lincRNA
Gene id: ENSG00000261020
Gene Name: RP11-744K17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4016-4032
0.009
1
7mer
3423-3440
0.008
1
6mer
3102-3122
0.003
1
6mer
3397-3410
0.003
1
6mer
3528-3552
0.002
0
6mer
3281-3302
0.002
0
6mer
831-852
0.001
0
APTR
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000440088
Biotype: lincRNA
Gene id: ENSG00000214293
Gene Name: APTR
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
41-58
0.025
0
6mer
436-458
0.004
1
HORMAD2-AS1
hsa-miR-181a-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000429350
Biotype: antisense
Gene id: ENSG00000227117
Gene Name: HORMAD2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
319-341
0.029
6
CTA-941F9.10
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623075
Biotype: sense_overlapping
Gene id: ENSG00000280383
Gene Name: CTA-941F9.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
92-116
0.004
Not Conserved
7mer
13639-13664
0.004
1
7mer
12799-12813
0.003
0
7mer
5340-5352
0.003
1
6mer
8589-8604
0.003
1
6mer
18684-18704
0.002
2
6mer
4222-4244
0.002
0
6mer
21615-21640
0.002
0
6mer
4658-4678
0.001
0
6mer
3969-3992
0.001
0
7mer
12801-12827
0.001
1
6mer
14357-14376
0.001
0
6mer
13688-13710
0.001
1
CTD-2171N6.1
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000589125
Biotype: lincRNA
Gene id: ENSG00000267013
Gene Name: CTD-2171N6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
716-740
0.016
3
7mer
1284-1304
0.004
Not Conserved
6mer
312-321
0.004
0
6mer
2250-2271
0.004
1
RP11-108M9.1
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000414340
Biotype: lincRNA
Gene id: ENSG00000223643
Gene Name: RP11-108M9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
103-121
0.029
0
RP11-464D20.6
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583426
Biotype: sense_intronic
Gene id: ENSG00000264546
Gene Name: RP11-464D20.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
826-848
0.025
Not Conserved
6mer
1442-1466
0.004
1
RP11-388P9.2
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000414383
Biotype: antisense
Gene id: ENSG00000232682
Gene Name: RP11-388P9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
315-340
0.029
6
RP11-792A8.4
hsa-miR-181a-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000607978
Biotype: antisense
Gene id: ENSG00000272831
Gene Name: RP11-792A8.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37-63
0.029
4
FLJ10038
hsa-miR-181a-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_026891.1
Biotype: sense
Gene id: NR_026891.1 (gene)
Gene Name: FLJ10038
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
237-260
0.017
0
6mer
410-425
0.006
3
6mer
1187-1206
0.003
2
6mer
2983-3008
0.002
0
6mer
4131-4145
0.002
1
LINC00630
hsa-miR-181a-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000416381
Biotype: lincRNA
Gene id: ENSG00000223546
Gene Name: LINC00630
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1334-1360
0.017
1
6mer
1758-1775
0.006
1
6mer
1807-1822
0.005
1
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