LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
NR2F2-AS1
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000618776
Biotype: antisense
Gene id: ENSG00000247809
Gene Name: NR2F2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
190-212
0.029
6
6mer
431-452
0.003
Not Conserved
XLOC_007710
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015825
Biotype: transcript isomorph
Gene id: XLOC_007710
Gene Name: XLOC_007710
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1851-1876
0.016
0
6mer
191-212
0.015
0
RP11-715F3.2
hsa-miR-181a-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583253
Biotype: sense_intronic
Gene id: ENSG00000266783
Gene Name: RP11-715F3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
264-285
0.025
0
6mer
801-828
0.006
0
AL133243.3
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000614487
Biotype: sense_intronic
Gene id: ENSG00000274159
Gene Name: AL133243.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
239-264
0.031
1
RP11-281P23.2
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000514452
Biotype: lincRNA
Gene id: ENSG00000249631
Gene Name: RP11-281P23.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
221-244
0.031
0
RP11-438D14.2
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000561632
Biotype: sense_intronic
Gene id: ENSG00000259937
Gene Name: RP11-438D14.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
725-750
0.025
1
6mer
811-829
0.006
0
AC145110.1
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522158
Biotype: lincRNA
Gene id: ENSG00000253490
Gene Name: AC145110.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2886-2908
0.031
1
ZEB1-AS1
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000607166
Biotype: antisense
Gene id: ENSG00000237036
Gene Name: ZEB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
101-123
0.028
0
6mer
821-848
0.003
1
XLOC_011014
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022738
Biotype: transcript isomorph
Gene id: XLOC_011014
Gene Name: XLOC_011014
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
134-153
0.031
0
RP11-466A19.1
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000581360
Biotype: antisense
Gene id: ENSG00000266718
Gene Name: RP11-466A19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1961-1982
0.025
2
6mer
1996-2012
0.003
0
6mer
170-194
0.002
Not Conserved
RP11-166D19.1
hsa-miR-181a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000524376
Biotype: sense_overlapping
Gene id: ENSG00000255248
Gene Name: RP11-166D19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
9-31
0.011
6
7mer
546-559
0.010
3
6mer
2581-2598
0.006
4
6mer
1193-1210
0.004
2
RP11-565A3.2
hsa-miR-181a-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515660
Biotype: lincRNA
Gene id: ENSG00000250590
Gene Name: RP11-565A3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
121-140
0.031
0
PAX8-AS1
hsa-miR-181a-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000422956
Biotype: antisense
Gene id: ENSG00000189223
Gene Name: PAX8-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
203-221
0.005
1
6mer
902-921
0.005
6
6mer
10937-10959
0.004
1
7mer
5099-5121
0.003
3
6mer
8763-8778
0.003
7
7mer
2355-2368
0.003
1
6mer
619-643
0.002
0
6mer
7866-7888
0.002
1
6mer
9803-9821
0.002
4
6mer
5424-5449
0.001
0
6mer
3959-3971
0.001
1
6mer
7925-7939
0.001
1
XLOC_007089
hsa-miR-181a-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015015
Biotype: transcript isomorph
Gene id: XLOC_007089
Gene Name: XLOC_007089
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1031-1055
0.011
1
6mer
666-689
0.007
0
6mer
137-157
0.003
Not Conserved
6mer
4013-4034
0.002
0
6mer
7108-7128
0.002
0
6mer
9428-9448
0.002
0
6mer
9201-9222
0.001
Not Conserved
6mer
5894-5921
0.001
Not Conserved
6mer
5281-5296
0.001
Not Conserved
KB-1674E1.1
hsa-miR-181a-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623776
Biotype: sense_intronic
Gene id: ENSG00000280413
Gene Name: KB-1674E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2848-2865
0.013
Not Conserved
6mer
4407-4424
0.005
Not Conserved
6mer
386-406
0.005
0
6mer
4571-4587
0.004
0
6mer
3389-3414
0.002
1
6mer
1205-1227
0.002
0
RP11-565A3.2
hsa-miR-181a-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507817
Biotype: lincRNA
Gene id: ENSG00000250590
Gene Name: RP11-565A3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
121-140
0.031
0
RP11-370I10.10
hsa-miR-181a-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000612739
Biotype: lincRNA
Gene id: ENSG00000275228
Gene Name: RP11-370I10.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
209-228
0.031
2
RP11-594N15.2
hsa-miR-181a-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522302
Biotype: lincRNA
Gene id: ENSG00000254266
Gene Name: RP11-594N15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
652-677
0.025
4
7mer
1780-1796
0.006
0
RP11-61L19.2
hsa-miR-181a-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000608162
Biotype: lincRNA
Gene id: ENSG00000273335
Gene Name: RP11-61L19.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
503-526
0.031
Not Conserved
CTD-2369P2.8
hsa-miR-181a-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589379
Biotype: antisense
Gene id: ENSG00000267607
Gene Name: CTD-2369P2.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
88-110
0.025
1
6mer
1013-1031
0.002
Not Conserved
6mer
910-927
0.002
0
6mer
766-788
0.002
0
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