LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
RP11-486L19.2
hsa-miR-181a-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000536986
Biotype: antisense
Gene id: ENSG00000250685
Gene Name: RP11-486L19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
678-698
0.025
0
6mer
809-829
0.003
1
6mer
643-659
0.003
1
6mer
1096-1117
0.002
1
RP11-307O13.1
hsa-miR-181a-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000568811
Biotype: lincRNA
Gene id: ENSG00000261728
Gene Name: RP11-307O13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1005-1032
0.015
1
8mer
584-604
0.012
1
6mer
769-796
0.004
3
XLOC_007998
hsa-miR-181a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017185
Biotype: transcript isomorph
Gene id: XLOC_007998
Gene Name: XLOC_007998
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
181-205
0.032
0
RP11-243A14.1
hsa-miR-181a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564305
Biotype: lincRNA
Gene id: ENSG00000261617
Gene Name: RP11-243A14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5200-5226
0.020
0
9mer
2647-2670
0.004
1
6mer
5008-5031
0.003
0
6mer
1200-1204
0.003
0
6mer
4072-4093
0.001
0
6mer
2670-2696
0.001
0
XLOC_001200
hsa-miR-181a-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001819
Biotype: transcript isomorph
Gene id: XLOC_001200
Gene Name: XLOC_001200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
9182-9204
0.005
2
7mer
4426-4442
0.005
1
6mer
395-403
0.005
2
7mer
5984-6006
0.004
3
6mer
336-352
0.003
1
6mer
110-137
0.003
Not Conserved
6mer
5073-5088
0.002
1
6mer
3121-3139
0.002
1
6mer
8245-8261
0.001
0
6mer
4790-4812
0.001
0
LINC00989
hsa-miR-181a-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515544
Biotype: lincRNA
Gene id: ENSG00000250334
Gene Name: LINC00989
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1950-1968
0.017
6
6mer
1893-1910
0.010
8
6mer
1312-1337
0.005
3
RP11-108M9.1
hsa-miR-181a-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422345
Biotype: lincRNA
Gene id: ENSG00000223643
Gene Name: RP11-108M9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
39-57
0.032
0
CTC-459F4.1
hsa-miR-181a-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000562493
Biotype: lincRNA
Gene id: ENSG00000261770
Gene Name: CTC-459F4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
251-268
0.032
0
RP11-1084I9.2
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000557426
Biotype: lincRNA
Gene id: ENSG00000258931
Gene Name: RP11-1084I9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
269-292
0.032
2
LINC01501
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000449990
Biotype: lincRNA
Gene id: ENSG00000229613
Gene Name: LINC01501
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
398-422
0.025
1
7mer
278-290
0.006
0
RP11-147L13.8
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591222
Biotype: lincRNA
Gene id: ENSG00000267731
Gene Name: RP11-147L13.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1613-1639
0.009
0
8mer
2576-2602
0.006
Not Conserved
6mer
2248-2265
0.005
0
7mer
997-1015
0.005
Not Conserved
6mer
2299-2313
0.005
0
6mer
1805-1824
0.002
Not Conserved
XLOC_009815
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020490
Biotype: transcript isomorph
Gene id: XLOC_009815
Gene Name: XLOC_009815
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
421-439
0.032
5
ADORA2A-AS1
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: NR_028483.1
Biotype: antisense
Gene id: NR_028483.1 (gene)
Gene Name: ADORA2A-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
12-33
0.021
1
7mer
1347-1365
0.010
0
RP11-299H22.7
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000569913
Biotype: lincRNA
Gene id: ENSG00000260957
Gene Name: RP11-299H22.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-412
0.017
1
7mer
449-473
0.015
1
XLOC_009187
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019361
Biotype: transcript isomorph
Gene id: XLOC_009187
Gene Name: XLOC_009187
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
103-123
0.032
0
RP5-965G21.3
hsa-miR-181a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000613361
Biotype: lincRNA
Gene id: ENSG00000277938
Gene Name: RP5-965G21.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2254-2274
0.021
1
7mer
952-977
0.007
1
6mer
2604-2622
0.004
0
LINC00989
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508174
Biotype: lincRNA
Gene id: ENSG00000250334
Gene Name: LINC00989
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1976-1994
0.017
6
6mer
1919-1936
0.010
8
6mer
1338-1363
0.005
3
XLOC_010409
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021809
Biotype: transcript isomorph
Gene id: XLOC_010409
Gene Name: XLOC_010409
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
47-65
0.020
0
6mer
82-98
0.007
1
6mer
138-159
0.005
3
LOC100499489
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_036533.1
Biotype: antisense
Gene id: NR_036533.1 (gene)
Gene Name: LOC100499489
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-131
0.032
0
RP6-91H8.3
hsa-miR-181a-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000602957
Biotype: lincRNA
Gene id: ENSG00000269927
Gene Name: RP6-91H8.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
107-122
0.018
1
6mer
1421-1437
0.010
4
6mer
56-83
0.003
0
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