LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
CTD-3116E22.7
hsa-miR-181a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585880
Biotype: lincRNA
Gene id: ENSG00000267612
Gene Name: CTD-3116E22.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
256-270
0.030
Not Conserved
6mer
213-239
0.003
Not Conserved
RP11-477N3.1
hsa-miR-181a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000606436
Biotype: lincRNA
Gene id: ENSG00000272156
Gene Name: RP11-477N3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
620-638
0.029
3
7mer
650-668
0.005
1
ARNTL2-AS1
hsa-miR-181a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500498
Biotype: antisense
Gene id: ENSG00000245311
Gene Name: ARNTL2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
532-556
0.034
1
FAM230B
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000424410
Biotype: lincRNA
Gene id: ENSG00000215498
Gene Name: FAM230B
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1826-1844
0.031
0
6mer
1264-1278
0.002
Not Conserved
LINC00469
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000544677
Biotype: lincRNA
Gene id: ENSG00000177338
Gene Name: LINC00469
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
440-458
0.034
1
RP11-148M9.1
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565531
Biotype: lincRNA
Gene id: ENSG00000260237
Gene Name: RP11-148M9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
404-427
0.034
0
RP11-468E2.11
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000619226
Biotype: sense_intronic
Gene id: ENSG00000278784
Gene Name: RP11-468E2.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
234-259
0.034
1
XLOC_004839
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010350
Biotype: transcript isomorph
Gene id: XLOC_004839
Gene Name: XLOC_004839
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3871-3887
0.029
0
6mer
1277-1297
0.002
1
6mer
1556-1573
0.001
2
6mer
1874-1896
0.001
1
XLOC_013779
hsa-miR-181a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028429
Biotype: transcript isomorph
Gene id: XLOC_013779
Gene Name: XLOC_013779
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3527-3543
0.024
0
6mer
2741-2763
0.002
0
6mer
2053-2078
0.002
0
6mer
1563-1585
0.002
0
6mer
2346-2370
0.001
Not Conserved
6mer
1758-1782
0.001
Not Conserved
6mer
1465-1487
0.001
Not Conserved
CTC-459F4.3
hsa-miR-181a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592404
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
194-205
0.021
0
6mer
505-528
0.013
0
LINC00704
hsa-miR-181a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000449712
Biotype: lincRNA
Gene id: ENSG00000231298
Gene Name: LINC00704
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
657-684
0.033
1
CTC-459F4.3
hsa-miR-181a-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587188
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
112-123
0.021
0
6mer
423-446
0.012
0
XLOC_006813
hsa-miR-181a-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014723
Biotype: transcript isomorph
Gene id: XLOC_006813
Gene Name: XLOC_006813
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
308-329
0.033
0
RP11-334J6.7
hsa-miR-181a-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000616163
Biotype: antisense
Gene id: ENSG00000176868
Gene Name: RP11-334J6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1599-1620
0.021
1
8mer
1512-1539
0.007
Not Conserved
7mer
496-521
0.006
1
RP11-434I12.2
hsa-miR-181a-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000514599
Biotype: antisense
Gene id: ENSG00000250295
Gene Name: RP11-434I12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
34-51
0.022
1
6mer
2124-2149
0.003
2
6mer
752-778
0.003
3
6mer
851-874
0.002
1
6mer
1470-1491
0.002
5
6mer
1442-1461
0.001
1
INTS6-AS1
hsa-miR-181a-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000601034
Biotype: antisense
Gene id: ENSG00000236778
Gene Name: INTS6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
704-726
0.016
0
6mer
2792-2817
0.008
4
8mer
1022-1048
0.008
1
6mer
728-752
0.002
1
XLOC_004128
hsa-miR-181a-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007884
Biotype: transcript isomorph
Gene id: XLOC_004128
Gene Name: XLOC_004128
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
171-189
0.022
0
6mer
397-421
0.012
0
RP11-261P13.6
hsa-miR-181a-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000619006
Biotype: sense_intronic
Gene id: ENSG00000275485
Gene Name: RP11-261P13.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
433-456
0.014
1
7mer
383-406
0.011
0
6mer
199-223
0.008
1
XLOC_009547
hsa-miR-181a-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019753
Biotype: transcript isomorph
Gene id: XLOC_009547
Gene Name: XLOC_009547
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
273-287
0.022
1
7mer
15-32
0.011
1
XLOC_004147
hsa-miR-181a-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007892
Biotype: transcript isomorph
Gene id: XLOC_004147
Gene Name: XLOC_004147
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
785-807
0.025
1
7mer
762-782
0.004
1
6mer
339-360
0.004
0
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