LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
LINC01227
hsa-miR-181a-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000561634
Biotype: lincRNA
Gene id: ENSG00000260737
Gene Name: LINC01227
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
312-333
0.034
1
LINC00939
hsa-miR-181a-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000502479
Biotype: lincRNA
Gene id: ENSG00000249267
Gene Name: LINC00939
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
4315-4341
0.013
0
7mer
4883-4897
0.010
0
7mer
269-287
0.010
2
6mer
2259-2286
0.002
0
XLOC_001704
hsa-miR-181a-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003029
Biotype: transcript isomorph
Gene id: XLOC_001704
Gene Name: XLOC_001704
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
450-468
0.021
5
7mer
105-119
0.008
1
6mer
476-496
0.005
0
XLOC_013463
hsa-miR-181a-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028108
Biotype: transcript isomorph
Gene id: XLOC_013463
Gene Name: XLOC_013463
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3419-3443
0.017
1
7mer
3505-3530
0.014
0
6mer
2851-2868
0.003
2
LINC00353
hsa-miR-181a-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_046991.1
Biotype: lincRNA
Gene id: NR_046991.1 (gene)
Gene Name: LINC00353
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
27-50
0.034
1
MIR503HG
hsa-miR-181a-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000414769
Biotype: lincRNA
Gene id: ENSG00000223749
Gene Name: MIR503HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
294-309
0.013
6
6mer
114-141
0.012
6
7mer
552-573
0.009
1
RP11-348J24.2
hsa-miR-181a-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000502934
Biotype: lincRNA
Gene id: ENSG00000250049
Gene Name: RP11-348J24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2380-2402
0.012
1
7mer
1963-1982
0.009
2
6mer
2917-2933
0.007
1
6mer
541-559
0.004
1
6mer
1023-1045
0.002
0
XLOC_011550
hsa-miR-181a-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023758
Biotype: transcript isomorph
Gene id: XLOC_011550
Gene Name: XLOC_011550
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28-50
0.034
1
XLOC_009200
hsa-miR-181a-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019375
Biotype: transcript isomorph
Gene id: XLOC_009200
Gene Name: XLOC_009200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
255-274
0.019
1
7mer
1209-1231
0.015
0
GPR1-AS
hsa-miR-181a-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000623040
Biotype: antisense
Gene id: ENSG00000279220
Gene Name: GPR1-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3085-3106
0.022
1
6mer
3663-3681
0.007
1
6mer
2303-2323
0.003
1
6mer
2549-2571
0.003
1
MIAT
hsa-miR-181a-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000620145
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
10002-10015
0.023
5
6mer
9899-9921
0.004
3
7mer
1145-1167
0.004
1
6mer
8881-8901
0.002
0
6mer
3505-3526
0.001
0
XLOC_013047
hsa-miR-181a-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026830
Biotype: transcript isomorph
Gene id: XLOC_013047
Gene Name: XLOC_013047
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1938-1960
0.014
1
8mer
1370-1386
0.011
1
6mer
456-472
0.010
2
MIR4458HG
hsa-miR-181a-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000502001
Biotype: lincRNA
Gene id: ENSG00000247516
Gene Name: MIR4458HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
843-861
0.025
1
6mer
898-918
0.009
1
EIF3J-AS1
hsa-miR-181a-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560049
Biotype: lincRNA
Gene id: ENSG00000179523
Gene Name: EIF3J-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
403-423
0.034
1
XLOC_011213
hsa-miR-181a-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023356
Biotype: transcript isomorph
Gene id: XLOC_011213
Gene Name: XLOC_011213
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-251
0.031
1
6mer
1038-1054
0.003
1
LINC00941
hsa-miR-181a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551972
Biotype: lincRNA
Gene id: ENSG00000235884
Gene Name: LINC00941
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
69-87
0.027
1
6mer
114-136
0.007
1
CTA-992D9.9
hsa-miR-181a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624792
Biotype: lincRNA
Gene id: ENSG00000279848
Gene Name: CTA-992D9.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
230-246
0.028
1
6mer
1206-1223
0.006
1
AC062031.1
hsa-miR-181a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414967
Biotype: lincRNA
Gene id: ENSG00000233842
Gene Name: AC062031.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
627-649
0.021
1
7mer
298-312
0.005
1
6mer
16-29
0.004
1
6mer
347-372
0.003
1
CTB-113P19.1
hsa-miR-181a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510576
Biotype: antisense
Gene id: ENSG00000249035
Gene Name: CTB-113P19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1880-1907
0.031
0
6mer
977-995
0.003
7
MIAT
hsa-miR-181a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000616469
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
10002-10015
0.023
5
6mer
9899-9921
0.004
3
7mer
1271-1293
0.003
1
6mer
8881-8901
0.002
0
6mer
3505-3526
0.001
0
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