LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
LINC00704
hsa-miR-181a-5p
0.830
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000430998
Biotype: lincRNA
Gene id: ENSG00000231298
Gene Name: LINC00704
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1410-1437
0.033
1
6mer
222-241
0.004
0
DLX6-AS1
hsa-miR-181a-5p
0.830
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000431497
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3-26
0.034
5
6mer
1938-1963
0.001
Not Conserved
6mer
1644-1665
0.001
0
XLOC_006950
hsa-miR-181a-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014471
Biotype: transcript isomorph
Gene id: XLOC_006950
Gene Name: XLOC_006950
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
708-734
0.023
1
7mer
310-326
0.008
1
6mer
133-145
0.003
Not Conserved
7mer
181-203
0.002
Not Conserved
LINC00051
hsa-miR-181a-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517704
Biotype: antisense
Gene id: ENSG00000254008
Gene Name: LINC00051
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
708-734
0.023
1
7mer
310-326
0.008
1
6mer
133-145
0.003
Not Conserved
7mer
181-203
0.002
Not Conserved
RP11-523L20.1
hsa-miR-181a-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562980
Biotype: lincRNA
Gene id: ENSG00000260450
Gene Name: RP11-523L20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
40-59
0.036
5
XLOC_010593
hsa-miR-181a-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021644
Biotype: transcript isomorph
Gene id: XLOC_010593
Gene Name: XLOC_010593
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1721-1742
0.036
0
RP11-69C13.1
hsa-miR-181a-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000418574
Biotype: lincRNA
Gene id: ENSG00000255871
Gene Name: RP11-69C13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2139-2153
0.022
1
6mer
2008-2018
0.007
1
6mer
939-964
0.003
1
6mer
1202-1221
0.002
1
6mer
964-975
0.001
1
XLOC_002258
hsa-miR-181a-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004374
Biotype: transcript isomorph
Gene id: XLOC_002258
Gene Name: XLOC_002258
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2554-2581
0.019
1
7mer
749-770
0.017
1
RP11-415J8.7
hsa-miR-181a-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000602618
Biotype: lincRNA
Gene id: ENSG00000270115
Gene Name: RP11-415J8.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
283-301
0.036
1
XLOC_003653
hsa-miR-181a-5p
0.827
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008872
Biotype: transcript isomorph
Gene id: XLOC_003653
Gene Name: XLOC_003653
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
326-350
0.021
1
7mer
768-794
0.012
2
6mer
474-492
0.003
1
RP11-769N19.2
hsa-miR-181a-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547084
Biotype: sense_intronic
Gene id: ENSG00000257880
Gene Name: RP11-769N19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
299-323
0.033
2
6mer
448-468
0.003
2
XLOC_002908
hsa-miR-181a-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006304
Biotype: transcript isomorph
Gene id: XLOC_002908
Gene Name: XLOC_002908
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Heart Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
82-89
0.019
1
6mer
904-923
0.006
1
6mer
434-451
0.005
2
6mer
616-630
0.005
1
RP11-114G22.1
hsa-miR-181a-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000540895
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
359-385
0.031
2
6mer
1732-1752
0.005
4
KCNA3
hsa-miR-181a-5p
0.825
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000566942
Biotype: lincRNA
Gene id: ENSG00000259834
Gene Name: KCNA3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
34-59
0.013
8
8mer
2470-2491
0.013
1
6mer
2817-2842
0.004
4
6mer
2916-2940
0.004
0
6mer
2669-2684
0.002
1
XLOC_007193
hsa-miR-181a-5p
0.825
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015150
Biotype: transcript isomorph
Gene id: XLOC_007193
Gene Name: XLOC_007193
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
575-602
0.027
1
6mer
825-851
0.005
0
6mer
496-519
0.004
1
C21orf90
hsa-miR-181a-5p
0.824
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000354333
Biotype: antisense
Gene id: ENSG00000182912
Gene Name: C21orf90
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2335-2361
0.020
1
7mer
2352-2375
0.016
2
RP11-463J7.2
hsa-miR-181a-5p
0.824
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000413356
Biotype: lincRNA
Gene id: ENSG00000231175
Gene Name: RP11-463J7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1921-1940
0.036
1
AC007879.2
hsa-miR-181a-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000448786
Biotype: lincRNA
Gene id: ENSG00000234902
Gene Name: AC007879.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
739-759
0.029
0
6mer
152-165
0.007
4
LINC01227
hsa-miR-181a-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565215
Biotype: lincRNA
Gene id: ENSG00000260737
Gene Name: LINC01227
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-214
0.036
1
PP7080
hsa-miR-181a-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000342584
Biotype: antisense
Gene id: ENSG00000188242
Gene Name: PP7080
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
404-418
0.036
9
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