LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CASC7
hsa-miR-15a-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000560295
Biotype: lincRNA
Gene id: ENSG00000259758
Gene Name: CASC7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
634-657
0.015
8
8mer+wobble
2962-2981
0.006
8
6mer
8317-8332
0.002
0
6mer
5498-5516
0.002
0
6mer
2848-2868
0.002
7
6mer
1897-1921
0.001
2
6mer
5238-5258
0.001
1
RP5-827E24.1
hsa-miR-15a-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000620506
Biotype: lincRNA
Gene id: ENSG00000277270
Gene Name: RP5-827E24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
454-479
0.020
2
7mer
214-231
0.010
1
RP11-88G17.6
hsa-miR-15a-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000358748
Biotype: lincRNA
Gene id: ENSG00000196979
Gene Name: RP11-88G17.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3143-3168
0.024
1
6mer
2970-2993
0.006
1
FAM87A
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000330148
Biotype: lincRNA
Gene id: ENSG00000182366
Gene Name: FAM87A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3447-3463
0.013
0
7mer
3107-3129
0.008
1
6mer
3877-3890
0.004
1
6mer
1410-1435
0.002
1
6mer
3262-3285
0.002
Not Conserved
6mer
1086-1102
0.001
0
RP11-475A13.1
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558963
Biotype: lincRNA
Gene id: ENSG00000259737
Gene Name: RP11-475A13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2395-2420
0.027
2
6mer
2096-2114
0.003
1
GSN-AS1
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000414544
Biotype: antisense
Gene id: ENSG00000235865
Gene Name: GSN-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4240-4256
0.010
1
8mer
4073-4096
0.005
0
7mer
527-538
0.005
2
6mer
4578-4603
0.004
3
8mer
764-787
0.003
0
6mer
883-904
0.003
3
AC012146.7
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000623522
Biotype: TEC
Gene id: ENSG00000234327
Gene Name: AC012146.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
445-469
0.023
1
6mer
216-232
0.007
3
AC011518.2
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593038
Biotype: lincRNA
Gene id: ENSG00000267133
Gene Name: AC011518.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
327-351
0.030
3
RP11-64C12.4
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000592203
Biotype: lincRNA
Gene id: ENSG00000267643
Gene Name: RP11-64C12.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
112-127
0.030
0
RP11-477D19.2
hsa-miR-15a-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000435295
Biotype: antisense
Gene id: ENSG00000235381
Gene Name: RP11-477D19.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2418-2443
0.013
2
6mer
2950-2975
0.008
7
6mer
2965-2984
0.005
5
6mer
249-274
0.004
0
AC104777.4
hsa-miR-15a-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_110246.1
Biotype: lincRNA
Gene id: NR_110246.1 (gene)
Gene Name: AC104777.4
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
158-174
0.030
1
XLOC_002108
hsa-miR-15a-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004266
Biotype: transcript isomorph
Gene id: XLOC_002108
Gene Name: XLOC_002108
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
109-125
0.018
3
8mer
363-387
0.010
1
6mer
278-294
0.002
Not Conserved
XLOC_003641
hsa-miR-15a-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008193
Biotype: transcript isomorph
Gene id: XLOC_003641
Gene Name: XLOC_003641
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4521-4541
0.010
1
7mer
702-724
0.009
1
7mer
4253-4271
0.007
0
6mer
206-227
0.005
1
LINC01362
hsa-miR-15a-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000452901
Biotype: lincRNA
Gene id: ENSG00000230817
Gene Name: LINC01362
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1683-1703
0.030
1
AC003665.1
hsa-miR-15a-5p
0.766
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000451140
Biotype: antisense
Gene id: ENSG00000234494
Gene Name: AC003665.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
973-997
0.030
3
XLOC_005783
hsa-miR-15a-5p
0.766
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012225
Biotype: transcript isomorph
Gene id: XLOC_005783
Gene Name: XLOC_005783
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
290-301
0.030
1
RP4-734G22.3
hsa-miR-15a-5p
0.766
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000606802
Biotype: antisense
Gene id: ENSG00000272078
Gene Name: RP4-734G22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7431-7452
0.015
10
6mer
1516-1528
0.004
13
6mer
7846-7862
0.003
Not Conserved
7mer
1679-1704
0.003
2
8mer
5380-5391
0.003
Not Conserved
6mer
7143-7163
0.002
1
6mer
3095-3118
0.001
1
RP1-27K12.2
hsa-miR-15a-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000502390
Biotype: lincRNA
Gene id: ENSG00000231683
Gene Name: RP1-27K12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3507-3534
0.018
2
7mer
2900-2919
0.010
2
6mer
2601-2613
0.002
0
SLC7A11-AS1
hsa-miR-15a-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000510767
Biotype: antisense
Gene id: ENSG00000250033
Gene Name: SLC7A11-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2831-2858
0.018
3
8mer
3211-3218
0.007
1
6mer
436-449
0.004
3
6mer
2539-2550
0.001
0
XLOC_002958
hsa-miR-15a-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00007059
Biotype: transcript isomorph
Gene id: XLOC_002958
Gene Name: XLOC_002958
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2249-2266
0.021
1
6mer
2624-2649
0.005
3
6mer
2440-2466
0.003
1
6mer
588-607
0.002
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept