LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_002407
hsa-miR-15a-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003450
Biotype: transcript isomorph
Gene id: XLOC_002407
Gene Name: XLOC_002407
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1083-1104
0.024
4
7mer
268-285
0.007
1
6mer
349-364
0.005
4
LINC00638
hsa-miR-15a-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555578
Biotype: lincRNA
Gene id: ENSG00000258701
Gene Name: LINC00638
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1858-1878
0.021
1
8mer
2199-2217
0.015
0
RP11-434I12.2
hsa-miR-15a-5p
0.822
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000514599
Biotype: antisense
Gene id: ENSG00000250295
Gene Name: RP11-434I12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3154-3175
0.015
3
8mer
2857-2876
0.014
1
7mer
2632-2653
0.007
1
RP11-112H10.4
hsa-miR-15a-5p
0.822
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000578022
Biotype: antisense
Gene id: ENSG00000264672
Gene Name: RP11-112H10.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
571-592
0.028
1
6mer
13-36
0.004
1
6mer
309-323
0.003
4
XLOC_009857
hsa-miR-15a-5p
0.822
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020542
Biotype: transcript isomorph
Gene id: XLOC_009857
Gene Name: XLOC_009857
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
421-440
0.036
0
XLOC_006923
hsa-miR-15a-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014546
Biotype: transcript isomorph
Gene id: XLOC_006923
Gene Name: XLOC_006923
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
275-299
0.017
0
7mer
261-283
0.006
0
8mer
2626-2636
0.005
2
6mer
339-352
0.003
1
6mer
389-414
0.003
1
6mer
3186-3199
0.001
Not Conserved
6mer
2477-2495
0.001
0
AC004053.1
hsa-miR-15a-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000500179
Biotype: antisense
Gene id: ENSG00000245384
Gene Name: AC004053.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
25-47
0.014
13
7mer
206-232
0.011
2
6mer
39-56
0.011
10
STEAP2-AS1
hsa-miR-15a-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000433534
Biotype: retained_intron
Gene id: ENSG00000227646
Gene Name: STEAP2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14-39
0.020
0
7mer
418-439
0.016
1
AC003665.1
hsa-miR-15a-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000411573
Biotype: antisense
Gene id: ENSG00000234494
Gene Name: AC003665.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
462-486
0.033
3
6mer
1092-1116
0.003
1
C1orf132
hsa-miR-15a-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608023
Biotype: lincRNA
Gene id: ENSG00000203709
Gene Name: C1orf132
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
14468-14485
0.007
6
7mer
880-894
0.005
1
6mer
14966-14991
0.003
1
7mer
3903-3916
0.003
0
7mer
11473-11497
0.003
1
7mer
13403-13411
0.002
0
6mer
9503-9529
0.002
2
6mer
3350-3366
0.002
1
6mer
7633-7653
0.002
2
6mer
12231-12253
0.002
2
6mer
9995-10020
0.002
4
6mer
6239-6254
0.001
2
6mer
14392-14410
0.001
1
6mer
4728-4746
0.001
1
6mer
13071-13091
0.001
1
6mer
11455-11469
0.001
2
XLOC_002925
hsa-miR-15a-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006314
Biotype: transcript isomorph
Gene id: XLOC_002925
Gene Name: XLOC_002925
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1685-1705
0.023
2
7mer
890-914
0.012
6
XLOC_004312
hsa-miR-15a-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009369
Biotype: transcript isomorph
Gene id: XLOC_004312
Gene Name: XLOC_004312
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
409-430
0.017
1
7mer
467-488
0.010
1
7mer
358-371
0.004
0
6mer
353-369
0.004
0
RP11-356I2.4
hsa-miR-15a-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606998
Biotype: antisense
Gene id: ENSG00000237499
Gene Name: RP11-356I2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Breast Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
191-210
0.021
2
8mer
1826-1848
0.014
0
RP11-4O3.2
hsa-miR-15a-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508135
Biotype: lincRNA
Gene id: ENSG00000249831
Gene Name: RP11-4O3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
44-56
0.022
4
7mer
1854-1877
0.009
1
6mer
163-179
0.004
0
AC011747.4
hsa-miR-15a-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454224
Biotype: lincRNA
Gene id: ENSG00000236008
Gene Name: AC011747.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1724-1739
0.020
0
7mer
683-703
0.010
0
7mer
6582-6608
0.004
0
6mer
8039-8061
0.001
Not Conserved
AC009014.3
hsa-miR-15a-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607574
Biotype: lincRNA
Gene id: ENSG00000271824
Gene Name: AC009014.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
886-899
0.015
8
7mer
276-302
0.009
3
7mer
868-878
0.007
9
7mer
870-894
0.005
7
DLGAP1-AS3
hsa-miR-15a-5p
0.816
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000577649
Biotype: antisense
Gene id: ENSG00000263724
Gene Name: DLGAP1-AS3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
271-283
0.017
2
7mer
570-590
0.015
1
6mer
467-482
0.003
0
RP11-439C8.2
hsa-miR-15a-5p
0.816
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000486545
Biotype: lincRNA
Gene id: ENSG00000243953
Gene Name: RP11-439C8.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
161-181
0.035
7
AC003665.1
hsa-miR-15a-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_103857.1
Biotype: antisense
Gene id: NR_103857.1 (gene)
Gene Name: AC003665.1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
861-885
0.035
3
ST7-OT4
hsa-miR-15a-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000397751
Biotype: sense_intronic
Gene id: ENSG00000214188
Gene Name: ST7-OT4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
57-79
0.017
1
6mer
234-251
0.007
4
6mer
122-147
0.007
3
6mer
360-383
0.004
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept