LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-114G22.1
hsa-miR-15a-5p
0.859
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000590328
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
736-758
0.017
5
7mer
722-745
0.016
4
6mer
810-835
0.007
4
RP1-309I22.2
hsa-miR-15a-5p
0.859
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
530-542
0.018
1
7mer
9994-10011
0.006
2
7mer
12963-12979
0.003
2
7mer
27566-27584
0.003
0
6mer
22181-22198
0.002
1
6mer
16134-16147
0.002
2
6mer
21662-21685
0.001
5
6mer
7244-7263
0.001
1
6mer
15366-15380
0.001
3
6mer
3772-3783
0.001
0
6mer
7662-7688
0.001
0
6mer
3907-3919
0.001
0
XLOC_012582
hsa-miR-15a-5p
0.859
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025772
Biotype: transcript isomorph
Gene id: XLOC_012582
Gene Name: XLOC_012582
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
360-384
0.013
0
7mer
339-361
0.013
0
6mer
1368-1393
0.008
1
6mer
1417-1442
0.007
0
AC007278.3
hsa-miR-15a-5p
0.858
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000450893
Biotype: sense_intronic
Gene id: ENSG00000234389
Gene Name: AC007278.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1173-1190
0.040
1
XLOC_010069
hsa-miR-15a-5p
0.858
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020779
Biotype: transcript isomorph
Gene id: XLOC_010069
Gene Name: XLOC_010069
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
306-327
0.040
1
RP11-227H15.4
hsa-miR-15a-5p
0.858
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000450995
Biotype: antisense
Gene id: ENSG00000229261
Gene Name: RP11-227H15.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
617-639
0.040
0
RP11-381O7.3
hsa-miR-15a-5p
0.858
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000315293
Biotype: lincRNA
Gene id: ENSG00000182021
Gene Name: RP11-381O7.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2440-2461
0.035
1
6mer
203-215
0.005
1
LINC00894
hsa-miR-15a-5p
0.857
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000425602
Biotype: antisense
Gene id: ENSG00000235703
Gene Name: LINC00894
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1581-1596
0.035
2
6mer
1525-1543
0.005
0
MAGI2-AS3
hsa-miR-15a-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000446159
Biotype: antisense
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
277-296
0.037
1
6mer
377-389
0.003
0
LINC00662
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586954
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
381-404
0.027
0
6mer
1367-1386
0.007
0
7mer
378-404
0.004
Not Conserved
6mer
2045-2068
0.002
Not Conserved
XLOC_006578
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013937
Biotype: transcript isomorph
Gene id: XLOC_006578
Gene Name: XLOC_006578
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
365-383
0.032
2
7mer
954-971
0.004
1
6mer
1009-1035
0.003
2
RP11-290F5.1
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000617323
Biotype: lincRNA
Gene id: ENSG00000249096
Gene Name: RP11-290F5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1614-1626
0.037
1
6mer
1543-1562
0.003
0
RP11-114G22.1
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000538317
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
110-133
0.015
4
7mer
124-146
0.014
5
6mer
378-394
0.005
0
6mer
198-223
0.005
4
AC005618.6
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606901
Biotype: lincRNA
Gene id: ENSG00000272070
Gene Name: AC005618.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
781-804
0.031
1
7mer
2248-2270
0.008
1
LOC441204
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_015364.2
Biotype: lincRNA
Gene id: NR_015364.2 (gene)
Gene Name: LOC441204
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1554-1571
0.024
2
7mer
109-129
0.009
1
6mer
571-587
0.004
3
6mer
1130-1147
0.003
0
XLOC_005623
hsa-miR-15a-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012093
Biotype: transcript isomorph
Gene id: XLOC_005623
Gene Name: XLOC_005623
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
164-179
0.040
0
AC079779.5
hsa-miR-15a-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000587073
Biotype: lincRNA
Gene id: ENSG00000235779
Gene Name: AC079779.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
65-90
0.040
1
CTD-2034I4.1
hsa-miR-15a-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559211
Biotype: lincRNA
Gene id: ENSG00000259543
Gene Name: CTD-2034I4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
312-329
0.040
2
NDUFA6-AS1
hsa-miR-15a-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000439129
Biotype: antisense
Gene id: ENSG00000237037
Gene Name: NDUFA6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2364-2387
0.012
1
7mer
2364-2384
0.010
2
7mer
1315-1335
0.005
2
7mer
683-708
0.004
0
8mer
1315-1338
0.004
1
7mer
1732-1757
0.003
0
LINC01287
hsa-miR-15a-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000416982
Biotype: lincRNA
Gene id: ENSG00000234722
Gene Name: LINC01287
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
176-196
0.040
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept