LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-155-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP13-192B19.2
hsa-miR-155-5p
0.830
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000569460
Biotype: lincRNA
Gene id: ENSG00000260585
Gene Name: RP13-192B19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
89-107
0.021
1
8mer
3267-3288
0.009
4
6mer
3207-3225
0.005
8
6mer
3595-3618
0.002
0
RP11-352E8.2
hsa-miR-155-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608631
Biotype: lincRNA
Gene id: ENSG00000272859
Gene Name: RP11-352E8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
118-137
0.030
0
6mer
341-361
0.006
0
CTA-992D9.11
hsa-miR-155-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623027
Biotype: lincRNA
Gene id: ENSG00000279440
Gene Name: CTA-992D9.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4210-4227
0.036
5
RP11-109D24.1
hsa-miR-155-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562568
Biotype: sense_intronic
Gene id: ENSG00000260600
Gene Name: RP11-109D24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
329-355
0.017
1
6mer
53-70
0.007
1
6mer
1394-1417
0.006
4
6mer
903-922
0.003
0
6mer
453-469
0.003
1
TTN-AS1
hsa-miR-155-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419746
Biotype: antisense
Gene id: ENSG00000237298
Gene Name: TTN-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4553-4572
0.027
2
7mer
1848-1865
0.009
10
XLOC_007199
hsa-miR-155-5p
0.827
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015154
Biotype: transcript isomorph
Gene id: XLOC_007199
Gene Name: XLOC_007199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
863-883
0.023
2
7mer
1754-1772
0.009
2
7mer
2177-2201
0.004
Not Conserved
RP11-217E22.5
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000463297
Biotype: lincRNA
Gene id: ENSG00000243486
Gene Name: RP11-217E22.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
523-545
0.029
1
6mer
224-245
0.007
3
RP11-531A24.3
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000564832
Biotype: lincRNA
Gene id: ENSG00000260838
Gene Name: RP11-531A24.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2771-2796
0.022
2
7mer
2625-2642
0.006
Not Conserved
6mer
420-440
0.005
3
6mer
2520-2538
0.004
1
RP11-476H20.1
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000435554
Biotype: lincRNA
Gene id: ENSG00000231714
Gene Name: RP11-476H20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68-92
0.036
2
CTD-2514K5.4
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583018
Biotype: antisense
Gene id: ENSG00000264272
Gene Name: CTD-2514K5.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
397-418
0.036
6
CTB-5E10.3
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586297
Biotype: antisense
Gene id: ENSG00000267633
Gene Name: CTB-5E10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
134-157
0.036
1
TSIX
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604411
Biotype: lincRNA
Gene id: ENSG00000270641
Gene Name: TSIX
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3342-3359
0.008
1
7mer
15199-15217
0.005
Not Conserved
7mer
12005-12025
0.005
Not Conserved
7mer
2859-2883
0.004
1
8mer
14562-14585
0.004
Not Conserved
6mer
28926-28950
0.003
3
6mer
7007-7028
0.002
0
6mer
20660-20669
0.002
0
6mer
17704-17716
0.002
1
6mer
8484-8509
0.001
0
RP11-190I17.2
hsa-miR-155-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584896
Biotype: lincRNA
Gene id: ENSG00000266153
Gene Name: RP11-190I17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-186
0.036
3
RP11-21A7A.4
hsa-miR-155-5p
0.825
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000544948
Biotype: antisense
Gene id: ENSG00000256481
Gene Name: RP11-21A7A.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
688-714
0.032
3
6mer
405-431
0.004
0
RP11-764K9.1
hsa-miR-155-5p
0.824
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000417843
Biotype: lincRNA
Gene id: ENSG00000225411
Gene Name: RP11-764K9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1627-1647
0.017
0
6mer
2716-2734
0.014
0
6mer
179-192
0.005
Not Conserved
LINC00643
hsa-miR-155-5p
0.824
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555518
Biotype: lincRNA
Gene id: ENSG00000186369
Gene Name: LINC00643
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
178-205
0.020
1
7mer
384-408
0.016
6
LINC00890
hsa-miR-155-5p
0.823
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000569275
Biotype: lincRNA
Gene id: ENSG00000260802
Gene Name: LINC00890
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4511-4537
0.017
1
8mer
3526-3548
0.016
4
6mer
4045-4069
0.003
1
RP3-333A15.1
hsa-miR-155-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426775
Biotype: antisense
Gene id: ENSG00000235782
Gene Name: RP3-333A15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
502-508
0.036
Not Conserved
RP11-195F19.30
hsa-miR-155-5p
0.818
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000564224
Biotype: retained_intron
Gene id: ENSG00000261215
Gene Name: RP11-195F19.30
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2937-2957
0.035
8
AC019117.1
hsa-miR-155-5p
0.818
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000419463
Biotype: lincRNA
Gene id: ENSG00000236318
Gene Name: AC019117.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
530-556
0.032
9
6mer
441-462
0.003
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept