LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00491
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_103756.1
Biotype: lincRNA
Gene id: NR_103756.1 (gene)
Gene Name: LINC00491
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1167-1178
0.013
0
7mer
1111-1137
0.013
1
CTD-2296D1.4
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513219
Biotype: antisense
Gene id: ENSG00000249865
Gene Name: CTD-2296D1.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
94-108
0.025
1
RP5-998H6.2
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000450586
Biotype: lincRNA
Gene id: ENSG00000229957
Gene Name: RP5-998H6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1496-1517
0.013
0
7mer
1771-1790
0.008
1
6mer
1439-1464
0.002
3
6mer
891-911
0.001
Not Conserved
MIATNB
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000449017
Biotype: lincRNA
Gene id: ENSG00000244625
Gene Name: MIATNB
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
489-511
0.017
1
8mer+mismatch
452-473
0.004
1
6mer
373-392
0.004
1
SRD5A3-AS1
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000610396
Biotype: retained_intron
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
335-345
0.019
1
6mer
155-180
0.006
6
MIAT
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000613780
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4443-4468
0.006
1
7mer
7966-7987
0.003
1
7mer
8569-8593
0.003
0
6mer
23-48
0.003
3
7mer
3487-3512
0.002
2
6mer
6147-6162
0.002
3
6mer
2465-2486
0.002
3
6mer
3697-3701
0.001
3
6mer
1111-1136
0.001
1
6mer
3607-3624
0.001
0
6mer
2288-2305
0.001
2
6mer
1642-1662
0.001
1
6mer
2504-2525
0.000
1
RP4-738P15.1
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000454676
Biotype: lincRNA
Gene id: ENSG00000230725
Gene Name: RP4-738P15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
372-396
0.011
1
7mer
2251-2263
0.008
1
6mer
585-612
0.003
0
6mer
1354-1374
0.002
1
6mer
1674-1700
0.001
0
SLC6A1-AS1
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000414969
Biotype: antisense
Gene id: ENSG00000232287
Gene Name: SLC6A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
113-134
0.015
0
7mer
321-346
0.010
2
LINC00491
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510145
Biotype: lincRNA
Gene id: ENSG00000250682
Gene Name: LINC00491
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
503-514
0.011
0
7mer
447-473
0.011
1
6mer
660-673
0.003
0
LOC729683
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_046273.1
Biotype: antisense
Gene id: NR_046273.1 (gene)
Gene Name: LOC729683
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1864-1884
0.013
0
7mer
1963-1988
0.006
1
7mer
1430-1440
0.004
0
6mer
109-129
0.003
0
CTA-212A2.2
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623490
Biotype: lincRNA
Gene id: ENSG00000279714
Gene Name: CTA-212A2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-39
0.021
Not Conserved
7mer
334-344
0.004
Not Conserved
6mer
918-944
0.001
Not Conserved
CTD-2021H9.1
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552098
Biotype: lincRNA
Gene id: ENSG00000257265
Gene Name: CTD-2021H9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
270-284
0.025
6
AC009303.1
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000590516
Biotype: antisense
Gene id: ENSG00000235066
Gene Name: AC009303.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
606-633
0.016
3
6mer
333-347
0.004
2
6mer
275-297
0.003
1
6mer
78-101
0.003
1
HOXC5
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000512206
Biotype: processed_transcript
Gene id: ENSG00000273046
Gene Name: HOXC5
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
236-260
0.014
5
7mer
34-58
0.006
Not Conserved
6mer
268-288
0.003
7
6mer
255-280
0.003
4
LINC00313
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000332440
Biotype: lincRNA
Gene id: ENSG00000185186
Gene Name: LINC00313
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
96-122
0.017
1
6mer
424-443
0.006
2
6mer
332-353
0.002
0
SRD5A3-AS1
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000510637
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
688-698
0.020
1
6mer
508-533
0.005
6
LINC00491
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505527
Biotype: lincRNA
Gene id: ENSG00000250682
Gene Name: LINC00491
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
399-410
0.010
0
7mer
343-369
0.008
1
6mer
546-572
0.003
2
6mer
690-703
0.003
0
RP11-840I19.3
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553633
Biotype: antisense
Gene id: ENSG00000259118
Gene Name: RP11-840I19.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
401-414
0.019
3
6mer
561-577
0.007
6
CTC-548K16.5
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590626
Biotype: antisense
Gene id: ENSG00000267379
Gene Name: CTC-548K16.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
95-114
0.025
5
XLOC_002368
hsa-miR-150-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005258
Biotype: transcript isomorph
Gene id: XLOC_002368
Gene Name: XLOC_002368
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4413-4438
0.018
1
6mer
263-279
0.004
1
6mer
875-896
0.002
0
6mer
2622-2642
0.001
4
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