LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-189E14.4
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000561523
Biotype: lincRNA
Gene id: ENSG00000261623
Gene Name: RP11-189E14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3603-3618
0.015
1
7mer
3391-3401
0.005
0
6mer
3551-3568
0.003
0
6mer
1596-1619
0.002
1
6mer
2123-2144
0.001
1
RNF139-AS1
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000499418
Biotype: lincRNA
Gene id: ENSG00000245149
Gene Name: RNF139-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5513-5536
0.013
2
7mer
555-565
0.004
0
7mer
3028-3055
0.004
1
6mer
2815-2841
0.002
3
6mer
4798-4814
0.002
1
XLOC_000649
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001361
Biotype: transcript isomorph
Gene id: XLOC_000649
Gene Name: XLOC_000649
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Ovary Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
417-442
0.026
1
RP11-432I5.4
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563557
Biotype: lincRNA
Gene id: ENSG00000260612
Gene Name: RP11-432I5.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
228-249
0.016
1
7mer
899-924
0.009
0
TTC39A-AS1
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000564479
Biotype: antisense
Gene id: ENSG00000261664
Gene Name: TTC39A-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
592-612
0.018
3
7mer
789-799
0.008
1
XLOC_011769
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024446
Biotype: transcript isomorph
Gene id: XLOC_011769
Gene Name: XLOC_011769
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
448-468
0.026
0
RP11-334J6.6
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000415423
Biotype: antisense
Gene id: ENSG00000230289
Gene Name: RP11-334J6.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
194-215
0.026
0
XLOC_005647
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012113
Biotype: transcript isomorph
Gene id: XLOC_005647
Gene Name: XLOC_005647
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
605-620
0.015
2
7mer
1473-1497
0.008
1
6mer
1234-1251
0.003
0
RP11-257P3.3
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523380
Biotype: antisense
Gene id: ENSG00000253374
Gene Name: RP11-257P3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-337
0.017
0
7mer
666-690
0.009
0
LINC01102
hsa-miR-150-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000451400
Biotype: lincRNA
Gene id: ENSG00000235597
Gene Name: LINC01102
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3571-3594
0.009
1
7mer
2409-2424
0.007
1
7mer
142-157
0.007
3
6mer
2468-2490
0.001
1
6mer
1467-1487
0.001
1
LINC01233
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601708
Biotype: lincRNA
Gene id: ENSG00000269364
Gene Name: LINC01233
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
135-156
0.014
0
6mer
51-73
0.012
0
RP11-538D16.2
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000411509
Biotype: lincRNA
Gene id: ENSG00000224810
Gene Name: RP11-538D16.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
964-981
0.011
1
6mer
254-268
0.006
1
6mer
2076-2096
0.005
2
6mer
2420-2445
0.003
0
AC068039.4
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000416361
Biotype: antisense
Gene id: ENSG00000228389
Gene Name: AC068039.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1261-1278
0.009
0
7mer
1731-1754
0.008
Not Conserved
6mer
976-993
0.008
0
RP11-78O9.1
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000439455
Biotype: antisense
Gene id: ENSG00000233482
Gene Name: RP11-78O9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
152-162
0.023
1
6mer
242-256
0.002
1
CTD-2313F11.1
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000596909
Biotype: antisense
Gene id: ENSG00000240535
Gene Name: CTD-2313F11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
452-465
0.018
1
7mer
899-920
0.007
1
RP11-285A1.1
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000566715
Biotype: lincRNA
Gene id: ENSG00000260988
Gene Name: RP11-285A1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1511-1527
0.019
1
7mer
342-365
0.003
Not Conserved
6mer
316-328
0.003
0
SRD5A3-AS1
hsa-miR-150-5p
0.712
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000596312
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
335-345
0.019
1
6mer
155-180
0.006
6
LOC100506022
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_104623.1
Biotype: lincRNA
Gene id: NR_104623.1 (gene)
Gene Name: LOC100506022
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2082-2092
0.006
1
7mer
1945-1968
0.005
1
6mer
1913-1928
0.002
1
RP11-123K19.1
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000451449
Biotype: antisense
Gene id: ENSG00000224842
Gene Name: RP11-123K19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
387-392
0.025
7
RP11-221J22.1
hsa-miR-150-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000465215
Biotype: lincRNA
Gene id: ENSG00000214407
Gene Name: RP11-221J22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
317-334
0.013
2
7mer
1184-1204
0.009
0
6mer
1548-1561
0.003
Not Conserved
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