LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
AC008060.5
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000415333
Biotype: antisense
Gene id: ENSG00000227365
Gene Name: AC008060.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
323-347
0.026
3
SRD5A3-AS1
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000595103
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
335-345
0.020
1
6mer
155-180
0.006
6
SVIL-AS1
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000438202
Biotype: antisense
Gene id: ENSG00000224597
Gene Name: SVIL-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
198-214
0.026
2
RP1-292B18.4
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000415477
Biotype: antisense
Gene id: ENSG00000223598
Gene Name: RP1-292B18.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
272-298
0.021
2
6mer
711-727
0.005
1
RP3-477O4.14
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000444933
Biotype: antisense
Gene id: ENSG00000230155
Gene Name: RP3-477O4.14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
289-313
0.014
2
7mer
443-464
0.011
2
RP11-598F7.4
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505893
Biotype: antisense
Gene id: ENSG00000249695
Gene Name: RP11-598F7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2738-2757
0.009
0
7mer
710-729
0.004
1
6mer
334-349
0.004
7
6mer
765-791
0.002
0
8mer+mismatch
944-963
0.002
3
6mer
1946-1965
0.001
2
6mer
1216-1227
0.001
0
6mer
1423-1438
0.001
0
6mer
1883-1908
0.001
1
6mer
1921-1943
0.001
1
CYP1B1-AS1
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000585654
Biotype: antisense
Gene id: ENSG00000232973
Gene Name: CYP1B1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-32
0.022
1
6mer
525-545
0.004
1
RNF139-AS1
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_108047.1
Biotype: lincRNA
Gene id: NR_108047.1 (gene)
Gene Name: RNF139-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5505-5528
0.013
2
7mer
3020-3047
0.004
1
7mer
547-557
0.004
0
6mer
2807-2833
0.002
3
6mer
4790-4806
0.002
1
XLOC_008367
hsa-miR-150-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018098
Biotype: transcript isomorph
Gene id: XLOC_008367
Gene Name: XLOC_008367
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1172-1197
0.026
1
HOTAIRM1
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000428939
Biotype: antisense
Gene id: ENSG00000233429
Gene Name: HOTAIRM1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
539-562
0.026
7
AC004160.4
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000425837
Biotype: antisense
Gene id: ENSG00000230435
Gene Name: AC004160.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
148-171
0.026
1
XLOC_007206
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014530
Biotype: transcript isomorph
Gene id: XLOC_007206
Gene Name: XLOC_007206
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5499-5522
0.013
2
7mer
3014-3041
0.004
1
7mer
541-551
0.004
0
6mer
2801-2827
0.002
3
6mer
4784-4800
0.002
1
XLOC_012056
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024780
Biotype: transcript isomorph
Gene id: XLOC_012056
Gene Name: XLOC_012056
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
474-493
0.018
1
6mer
660-684
0.005
0
6mer
58-77
0.003
Not Conserved
FTX
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602812
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2038-2057
0.026
2
MIR4435-1HG
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419736
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
298-315
0.026
6
AC007326.10
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624224
Biotype: lincRNA
Gene id: ENSG00000280418
Gene Name: AC007326.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
461-481
0.005
Not Conserved
7mer
4512-4534
0.004
2
8mer
2377-2399
0.002
0
6mer
5942-5965
0.002
2
6mer
1196-1200
0.002
0
6mer
5100-5121
0.001
2
6mer
2582-2590
0.001
1
6mer
1842-1855
0.001
0
6mer
6371-6391
0.001
1
7mer
1810-1824
0.001
0
7mer
2921-2946
0.001
0
6mer
6154-6176
0.001
1
6mer
2155-2175
0.001
0
6mer
3304-3329
0.001
1
6mer
3465-3487
0.001
1
6mer
4997-5022
0.000
2
6mer
4960-4981
0.000
1
6mer
2821-2843
0.000
0
XLOC_011783
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024228
Biotype: transcript isomorph
Gene id: XLOC_011783
Gene Name: XLOC_011783
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
354-373
0.024
9
6mer
122-148
0.002
0
HCCAT5
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000569990
Biotype: lincRNA
Gene id: ENSG00000260880
Gene Name: HCCAT5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
354-373
0.024
9
6mer
122-148
0.002
0
XLOC_002282
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003380
Biotype: transcript isomorph
Gene id: XLOC_002282
Gene Name: XLOC_002282
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2202-2213
0.015
0
6mer
1729-1752
0.005
1
7mer
2064-2085
0.004
0
6mer
2240-2257
0.003
1
RP11-886P16.6
hsa-miR-150-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595706
Biotype: antisense
Gene id: ENSG00000268931
Gene Name: RP11-886P16.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23-42
0.026
0
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