LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00483
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_073199.1
Biotype: lincRNA
Gene id: NR_073199.1 (gene)
Gene Name: LINC00483
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
728-748
0.021
1
6mer
645-666
0.005
5
RP11-1379J22.5
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000514793
Biotype: antisense
Gene id: ENSG00000250999
Gene Name: RP11-1379J22.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
438-458
0.023
0
6mer
154-170
0.003
0
FLJ10038
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_026891.1
Biotype: sense
Gene id: NR_026891.1 (gene)
Gene Name: FLJ10038
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3973-3993
0.008
1
6mer
5809-5832
0.007
8
8mer
3953-3979
0.007
0
6mer
5638-5662
0.003
2
6mer
5367-5386
0.002
1
AC097467.2
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000599555
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1094-1113
0.015
3
6mer
1178-1203
0.008
3
6mer
747-765
0.003
1
RP11-673E11.2
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000567082
Biotype: lincRNA
Gene id: ENSG00000261257
Gene Name: RP11-673E11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
916-937
0.010
6
7mer
1734-1753
0.009
0
6mer
55-82
0.004
1
6mer
868-892
0.003
8
XLOC_007087
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015010
Biotype: transcript isomorph
Gene id: XLOC_007087
Gene Name: XLOC_007087
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1487-1512
0.014
Not Conserved
7mer
1073-1086
0.009
1
6mer
370-395
0.003
1
RP1-253P7.1
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583598
Biotype: sense_intronic
Gene id: ENSG00000264167
Gene Name: RP1-253P7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
352-367
0.026
2
SVIL-AS1
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000430295
Biotype: antisense
Gene id: ENSG00000224597
Gene Name: SVIL-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
373-389
0.024
2
6mer
97-113
0.002
0
SRD5A3-AS1
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609573
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
272-282
0.020
1
6mer
92-117
0.006
6
AC004862.6
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_110075.1
Biotype: antisense
Gene id: NR_110075.1 (gene)
Gene Name: AC004862.6
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
59-86
0.026
2
RP11-141O11.2
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504280
Biotype: lincRNA
Gene id: ENSG00000249352
Gene Name: RP11-141O11.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
305-326
0.022
4
6mer
694-713
0.005
2
CTD-2501M5.1
hsa-miR-150-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519005
Biotype: lincRNA
Gene id: ENSG00000253507
Gene Name: CTD-2501M5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-135
0.026
0
XLOC_005077
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010550
Biotype: transcript isomorph
Gene id: XLOC_005077
Gene Name: XLOC_005077
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3992-4017
0.016
1
7mer
4436-4455
0.003
1
6mer
575-579
0.003
1
6mer
5784-5796
0.003
1
6mer
2880-2901
0.001
3
SRD5A3-AS1
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609580
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.020
1
6mer
99-124
0.006
6
CPB2-AS1
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000606243
Biotype: antisense
Gene id: ENSG00000235903
Gene Name: CPB2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1527-1548
0.009
Not Conserved
7mer
1938-1948
0.005
0
6mer
72-87
0.005
3
6mer
63-78
0.005
1
6mer
715-736
0.002
0
AC108056.1
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000442020
Biotype: lincRNA
Gene id: ENSG00000229565
Gene Name: AC108056.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
219-244
0.014
1
7mer
239-264
0.012
0
AC002511.2
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000413796
Biotype: lincRNA
Gene id: ENSG00000233214
Gene Name: AC002511.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
97-122
0.026
1
COL18A1-AS1
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000397787
Biotype: antisense
Gene id: ENSG00000183535
Gene Name: COL18A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3260-3279
0.013
0
7mer
1222-1239
0.003
1
6mer
134-148
0.003
1
7mer
2110-2129
0.002
1
6mer
2344-2367
0.002
1
6mer
778-804
0.001
1
6mer
1624-1637
0.001
0
8mer+wobble
2929-2952
0.001
0
6mer
772-794
0.001
1
AC007277.3
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000423519
Biotype: antisense
Gene id: ENSG00000213981
Gene Name: AC007277.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
989-1016
0.013
3
8mer
598-622
0.006
1
6mer
1004-1029
0.005
2
6mer
464-485
0.002
0
MIR4435-1HG
hsa-miR-150-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000604981
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
288-311
0.026
6
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