LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
EDRF1-AS1
hsa-miR-150-5p
0.724
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000622798
Biotype: antisense
Gene id: ENSG00000236991
Gene Name: EDRF1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
435-457
0.024
0
6mer
406-426
0.003
0
XLOC_006932
hsa-miR-150-5p
0.723
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014502
Biotype: transcript isomorph
Gene id: XLOC_006932
Gene Name: XLOC_006932
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1073-1099
0.016
1
7mer
73-91
0.005
1
6mer
1379-1393
0.004
2
6mer
687-707
0.002
2
RP11-785H5.1
hsa-miR-150-5p
0.723
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000622602
Biotype: lincRNA
Gene id: ENSG00000256537
Gene Name: RP11-785H5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4552-4571
0.009
1
7mer
4162-4167
0.009
0
6mer
3971-3994
0.002
0
6mer
1300-1322
0.002
1
6mer
1660-1669
0.001
0
6mer
3979-4004
0.001
2
7mer
1661-1677
0.001
0
6mer
1318-1335
0.001
2
XLOC_007759
hsa-miR-150-5p
0.723
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016391
Biotype: transcript isomorph
Gene id: XLOC_007759
Gene Name: XLOC_007759
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Placenta Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
235-246
0.017
1
6mer
172-197
0.005
1
6mer
89-104
0.004
1
SNORD109A
hsa-miR-150-5p
0.723
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000604135
Biotype: sense_intronic
Gene id: ENSG00000270246
Gene Name: SNORD109A
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-45
0.026
2
XLOC_013060
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026788
Biotype: transcript isomorph
Gene id: XLOC_013060
Gene Name: XLOC_013060
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
146-158
0.026
0
XLOC_006894
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014499
Biotype: transcript isomorph
Gene id: XLOC_006894
Gene Name: XLOC_006894
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
382-398
0.015
0
7mer
2525-2535
0.008
Not Conserved
6mer
2688-2703
0.003
0
CTD-2410N18.4
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000520515
Biotype: retained_intron
Gene id: ENSG00000273345
Gene Name: CTD-2410N18.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
368-383
0.026
9
RP11-74E22.8
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000614400
Biotype: lincRNA
Gene id: ENSG00000277200
Gene Name: RP11-74E22.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
560-586
0.009
0
7mer
2967-2986
0.005
1
7mer
2646-2656
0.004
0
6mer
779-802
0.003
3
6mer
2478-2493
0.003
1
6mer
2868-2890
0.002
1
6mer
1885-1906
0.001
2
6mer
1974-1998
0.001
3
ADAMTSL4-AS1
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000369035
Biotype: processed_transcript
Gene id: ENSG00000203804
Gene Name: ADAMTSL4-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
94-108
0.024
4
6mer
289-308
0.002
Not Conserved
C14orf64
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000512901
Biotype: lincRNA
Gene id: ENSG00000246223
Gene Name: C14orf64
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1083-1096
0.026
0
SNHG5
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000623163
Biotype: lincRNA
Gene id: ENSG00000203875
Gene Name: SNHG5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
720-730
0.022
0
7mer
516-526
0.004
0
RP13-452N2.1
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000481153
Biotype: retained_intron
Gene id: ENSG00000242048
Gene Name: RP13-452N2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20-47
0.014
0
7mer
265-280
0.012
1
SRD5A3-AS1
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609051
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.020
1
6mer
99-124
0.007
6
RP11-352D13.6
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000563004
Biotype: antisense
Gene id: ENSG00000261634
Gene Name: RP11-352D13.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2275-2298
0.010
1
8mer+wobble
1162-1185
0.006
Not Conserved
7mer
2162-2187
0.004
2
6mer
1706-1730
0.003
3
6mer
531-547
0.002
1
6mer
1132-1155
0.001
0
RP11-452F19.3
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000439440
Biotype: lincRNA
Gene id: ENSG00000228106
Gene Name: RP11-452F19.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
112-134
0.020
1
7mer
33-56
0.006
1
XLOC_002996
hsa-miR-150-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006377
Biotype: transcript isomorph
Gene id: XLOC_002996
Gene Name: XLOC_002996
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6767-6784
0.011
0
7mer
464-483
0.004
0
7mer
1045-1067
0.004
Not Conserved
7mer
2089-2104
0.002
Not Conserved
8mer+wobble
4596-4615
0.001
Not Conserved
6mer
2652-2668
0.001
Not Conserved
6mer
4026-4044
0.001
Not Conserved
6mer
4203-4225
0.001
Not Conserved
SRD5A3-AS1
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608265
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.020
1
6mer
99-124
0.007
6
LINC00483
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000450727
Biotype: lincRNA
Gene id: ENSG00000167117
Gene Name: LINC00483
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
588-608
0.021
1
6mer
505-526
0.005
5
XLOC_013778
hsa-miR-150-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028426
Biotype: transcript isomorph
Gene id: XLOC_013778
Gene Name: XLOC_013778
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5949-5972
0.008
2
7mer
6027-6053
0.005
1
6mer
27-42
0.003
1
7mer
2270-2295
0.003
Not Conserved
7mer
767-783
0.003
Not Conserved
6mer
5180-5202
0.002
1
6mer
661-677
0.001
Not Conserved
6mer
3380-3405
0.001
0
6mer
5147-5170
0.000
1
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