LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013468
hsa-miR-150-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028114
Biotype: transcript isomorph
Gene id: XLOC_013468
Gene Name: XLOC_013468
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
135-160
0.027
1
AC105339.1
hsa-miR-150-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000440479
Biotype: lincRNA
Gene id: ENSG00000228141
Gene Name: AC105339.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
902-927
0.009
4
7mer
1792-1802
0.004
1
7mer
1169-1190
0.004
1
6mer
2374-2392
0.003
2
6mer
773-788
0.003
4
7mer
1492-1507
0.002
1
6mer
2009-2021
0.002
1
RP5-1024C24.1
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000531002
Biotype: antisense
Gene id: ENSG00000254489
Gene Name: RP5-1024C24.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-418
0.021
1
6mer
293-314
0.006
2
RP11-1149O23.2
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518308
Biotype: antisense
Gene id: ENSG00000253930
Gene Name: RP11-1149O23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
157-167
0.027
1
RP11-744K17.1
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000562182
Biotype: lincRNA
Gene id: ENSG00000261020
Gene Name: RP11-744K17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1599-1626
0.014
1
7mer
3614-3627
0.004
0
6mer
3526-3539
0.004
1
6mer
1242-1265
0.002
1
6mer
1947-1970
0.002
1
8mer
1261-1277
0.001
Not Conserved
SRD5A3-AS1
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609700
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
277-287
0.020
1
6mer
97-122
0.006
6
RP11-297B17.3
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000509911
Biotype: antisense
Gene id: ENSG00000250850
Gene Name: RP11-297B17.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
284-297
0.027
3
MIR663AHG
hsa-miR-150-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000609914
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
528-547
0.027
0
XLOC_012999
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027503
Biotype: transcript isomorph
Gene id: XLOC_012999
Gene Name: XLOC_012999
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
324-339
0.027
0
LINC00330
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000414562
Biotype: lincRNA
Gene id: ENSG00000235097
Gene Name: LINC00330
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
490-513
0.009
0
7mer
1915-1941
0.007
2
7mer
82-92
0.006
0
7mer
808-818
0.004
1
RP11-167H9.6
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_110167.1
Biotype: lincRNA
Gene id: NR_110167.1 (gene)
Gene Name: RP11-167H9.6
UCSC graphic: -
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
179-203
0.014
0
7mer
414-438
0.013
0
C14orf182
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000528300
Biotype: lincRNA
Gene id: ENSG00000214900
Gene Name: C14orf182
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
754-775
0.011
1
7mer
557-576
0.008
1
7mer
2548-2558
0.005
1
7mer
2431-2456
0.002
0
6mer
1057-1074
0.001
Not Conserved
SRD5A3-AS1
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000609487
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.020
1
6mer
99-124
0.006
6
RP11-141M3.6
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000471537
Biotype: processed_transcript
Gene id: ENSG00000273328
Gene Name: RP11-141M3.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
648-660
0.018
1
7mer
974-993
0.005
0
6mer
2446-2461
0.002
1
6mer
1007-1029
0.001
1
AP001043.1
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000434589
Biotype: lincRNA
Gene id: ENSG00000229925
Gene Name: AP001043.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
252-271
0.027
5
XLOC_002560
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005379
Biotype: transcript isomorph
Gene id: XLOC_002560
Gene Name: XLOC_002560
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2175-2187
0.025
1
6mer
1305-1330
0.001
0
SNHG10
hsa-miR-150-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000500370
Biotype: antisense
Gene id: ENSG00000247092
Gene Name: SNHG10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
411-429
0.015
1
7mer
1289-1314
0.007
1
7mer
1427-1453
0.006
1
RP11-73E17.2
hsa-miR-150-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557373
Biotype: antisense
Gene id: ENSG00000258738
Gene Name: RP11-73E17.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1011-1037
0.011
5
7mer
1108-1133
0.011
8
7mer
381-400
0.003
0
6mer
832-854
0.001
0
XLOC_011485
hsa-miR-150-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023686
Biotype: transcript isomorph
Gene id: XLOC_011485
Gene Name: XLOC_011485
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
279-298
0.027
1
AC034187.2
hsa-miR-150-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000437047
Biotype: lincRNA
Gene id: ENSG00000224884
Gene Name: AC034187.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
223-245
0.012
1
8mer
236-258
0.010
0
7mer
371-394
0.005
1
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