LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-390D11.1
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000568391
Biotype: antisense
Gene id: ENSG00000261632
Gene Name: RP11-390D11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127-152
0.019
0
7mer
444-461
0.006
0
6mer
659-682
0.003
Not Conserved
RP5-1024G6.7
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000569869
Biotype: antisense
Gene id: ENSG00000259818
Gene Name: RP5-1024G6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2400-2417
0.017
0
7mer
534-551
0.005
0
7mer
882-907
0.004
1
6mer
1973-1988
0.001
1
DYX1C1-CCPG1
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000568310
Biotype: processed_transcript
Gene id: ENSG00000261771
Gene Name: DYX1C1-CCPG1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1030-1048
0.023
8
6mer
641-645
0.004
3
RP11-144A16.8
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000614969
Biotype: lincRNA
Gene id: ENSG00000276422
Gene Name: RP11-144A16.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
24-34
0.027
1
XLOC_008837
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017737
Biotype: transcript isomorph
Gene id: XLOC_008837
Gene Name: XLOC_008837
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
355-377
0.027
2
RP11-258F22.2
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000564417
Biotype: lincRNA
Gene id: ENSG00000260137
Gene Name: RP11-258F22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
156-169
0.027
0
AC133785.1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446213
Biotype: antisense
Gene id: ENSG00000233221
Gene Name: AC133785.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
293-314
0.025
1
6mer
491-506
0.002
0
RP11-141B14.1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000602760
Biotype: lincRNA
Gene id: ENSG00000270019
Gene Name: RP11-141B14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
331-349
0.015
2
7mer
145-155
0.012
1
RP11-99H8.1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000423187
Biotype: lincRNA
Gene id: ENSG00000226208
Gene Name: RP11-99H8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
132-154
0.016
1
7mer
306-316
0.012
1
SLC8A1-AS1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000596532
Biotype: antisense
Gene id: ENSG00000227028
Gene Name: SLC8A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
284-299
0.021
4
7mer
684-698
0.006
0
CTD-3187F8.2
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597569
Biotype: antisense
Gene id: ENSG00000268595
Gene Name: CTD-3187F8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
480-504
0.027
0
CTD-3110H11.1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558372
Biotype: lincRNA
Gene id: ENSG00000259715
Gene Name: CTD-3110H11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
112-122
0.009
1
6mer
511-529
0.008
3
7mer
294-319
0.005
1
6mer
424-449
0.005
1
IGFBP7-AS1
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000499667
Biotype: antisense
Gene id: ENSG00000245067
Gene Name: IGFBP7-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1094-1108
0.027
2
XLOC_003449
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007979
Biotype: transcript isomorph
Gene id: XLOC_003449
Gene Name: XLOC_003449
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
358-380
0.017
0
6mer
1739-1743
0.004
1
6mer
621-646
0.003
0
6mer
1391-1411
0.002
1
6mer
956-973
0.002
1
XLOC_001671
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003872
Biotype: transcript isomorph
Gene id: XLOC_001671
Gene Name: XLOC_001671
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9806-9823
0.005
Not Conserved
7mer
5311-5336
0.003
Not Conserved
8mer
7290-7306
0.003
Not Conserved
7mer
8681-8699
0.002
0
7mer
6759-6776
0.002
0
6mer
5130-5146
0.002
0
6mer
7847-7869
0.002
0
6mer
1753-1775
0.002
Not Conserved
8mer
9191-9213
0.002
Not Conserved
6mer
9759-9781
0.001
Not Conserved
6mer
9207-9228
0.001
0
7mer
8380-8401
0.001
Not Conserved
6mer
9070-9093
0.001
Not Conserved
LINC00483
hsa-miR-150-5p
0.734
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000419688
Biotype: lincRNA
Gene id: ENSG00000167117
Gene Name: LINC00483
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
352-372
0.021
1
6mer
269-290
0.006
5
RP11-946L20.4
hsa-miR-150-5p
0.733
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522778
Biotype: lincRNA
Gene id: ENSG00000253103
Gene Name: RP11-946L20.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2-18
0.027
0
MIR663AHG
hsa-miR-150-5p
0.733
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000609044
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
507-526
0.027
0
RP11-46A10.2
hsa-miR-150-5p
0.733
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422858
Biotype: lincRNA
Gene id: ENSG00000225857
Gene Name: RP11-46A10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
329-345
0.027
1
AC079117.1
hsa-miR-150-5p
0.733
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445178
Biotype: antisense
Gene id: ENSG00000234653
Gene Name: AC079117.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
164-182
0.017
0
6mer
51-69
0.007
1
6mer
539-544
0.004
1
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