LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00418
hsa-miR-150-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000444605
Biotype: lincRNA
Gene id: ENSG00000236169
Gene Name: LINC00418
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
93-118
0.028
4
LL22NC03-27C5.1
hsa-miR-150-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624219
Biotype: lincRNA
Gene id: ENSG00000278890
Gene Name: LL22NC03-27C5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5527-5546
0.016
0
6mer
337-358
0.004
1
6mer
4826-4851
0.002
2
6mer
382-404
0.002
1
8mer+mismatch
5131-5156
0.002
0
6mer
4867-4886
0.001
0
ADAM20P1
hsa-miR-150-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556964
Biotype: lincRNA
Gene id: ENSG00000259158
Gene Name: ADAM20P1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
83-101
0.028
2
RP13-452N2.1
hsa-miR-150-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000462083
Biotype: antisense
Gene id: ENSG00000242048
Gene Name: RP13-452N2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
146-173
0.012
0
7mer
391-406
0.011
1
6mer
138-151
0.005
0
RP11-480I12.10
hsa-miR-150-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000564127
Biotype: antisense
Gene id: ENSG00000260021
Gene Name: RP11-480I12.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-336
0.012
3
7mer
329-349
0.008
3
6mer
387-405
0.005
3
6mer
414-436
0.002
1
RP11-385J1.2
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000432385
Biotype: antisense
Gene id: ENSG00000237978
Gene Name: RP11-385J1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
179-205
0.023
1
6mer
170-185
0.004
1
AP000662.4
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000530595
Biotype: sense_overlapping
Gene id: ENSG00000254602
Gene Name: AP000662.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2557-2582
0.010
0
7mer
2665-2688
0.005
0
7mer
2541-2551
0.005
0
7mer
2214-2224
0.005
0
6mer
134-161
0.002
3
RP11-44N11.1
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000521482
Biotype: sense_intronic
Gene id: ENSG00000253372
Gene Name: RP11-44N11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
44-62
0.014
0
7mer
250-271
0.012
2
6mer
193-219
0.002
1
XLOC_010672
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022068
Biotype: transcript isomorph
Gene id: XLOC_010672
Gene Name: XLOC_010672
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
45-62
0.026
2
6mer
497-522
0.002
0
HOTAIRM1
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000425358
Biotype: antisense
Gene id: ENSG00000233429
Gene Name: HOTAIRM1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
460-483
0.026
7
6mer
86-100
0.002
4
MIR663AHG
hsa-miR-150-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000609202
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
371-390
0.019
0
7mer
423-440
0.009
0
CTA-109P11.4
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000549104
Biotype: lincRNA
Gene id: ENSG00000258114
Gene Name: CTA-109P11.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
59-79
0.027
Not Conserved
XLOC_005724
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012717
Biotype: transcript isomorph
Gene id: XLOC_005724
Gene Name: XLOC_005724
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
167-177
0.008
0
7mer
32-55
0.006
0
7mer
1626-1651
0.006
0
6mer
244-269
0.004
0
7mer
1097-1122
0.003
0
6mer
1084-1107
0.001
0
XLOC_010841
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022517
Biotype: transcript isomorph
Gene id: XLOC_010841
Gene Name: XLOC_010841
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
173-195
0.024
1
6mer
82-96
0.004
1
LINC01483
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000433856
Biotype: lincRNA
Gene id: ENSG00000227517
Gene Name: LINC01483
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-80
0.017
3
7mer
1680-1706
0.007
3
7mer
1815-1825
0.001
Not Conserved
6mer
1414-1426
0.001
0
SNHG5
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000589187
Biotype: lincRNA
Gene id: ENSG00000203875
Gene Name: SNHG5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
444-454
0.021
0
7mer
240-250
0.007
0
SRD5A3-AS1
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000619685
Biotype: retained_intron
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.021
1
6mer
99-124
0.006
6
XLOC_010896
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022583
Biotype: transcript isomorph
Gene id: XLOC_010896
Gene Name: XLOC_010896
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
370-394
0.016
2
7mer
592-614
0.007
0
6mer
361-374
0.005
1
LINC01122
hsa-miR-150-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000427421
Biotype: lincRNA
Gene id: ENSG00000233723
Gene Name: LINC01122
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1365-1387
0.019
1
7mer
1672-1682
0.005
0
7mer
928-950
0.004
0
RP11-16P6.1
hsa-miR-150-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000568928
Biotype: antisense
Gene id: ENSG00000261428
Gene Name: RP11-16P6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2644-2663
0.018
2
7mer
1377-1382
0.006
Not Conserved
6mer
2069-2091
0.003
1
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