LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP13-36G14.4
hsa-miR-150-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000603952
Biotype: sense_intronic
Gene id: ENSG00000270223
Gene Name: RP13-36G14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
537-547
0.028
1
CTD-2368P22.1
hsa-miR-150-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000550135
Biotype: antisense
Gene id: ENSG00000176593
Gene Name: CTD-2368P22.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
765-786
0.006
7
7mer
425-450
0.004
1
6mer
175-188
0.003
0
6mer
1067-1087
0.003
2
7mer
1849-1859
0.002
0
8mer
1866-1890
0.002
0
7mer
3156-3166
0.002
0
6mer
3952-3972
0.002
0
6mer
1523-1536
0.002
1
6mer
5310-5335
0.001
0
7mer
3306-3331
0.001
0
6mer
3997-4022
0.001
0
RP11-133L19.1
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558587
Biotype: antisense
Gene id: ENSG00000259620
Gene Name: RP11-133L19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
14-20
0.028
1
RP11-158I3.3
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000595705
Biotype: lincRNA
Gene id: ENSG00000269826
Gene Name: RP11-158I3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
598-617
0.023
1
6mer
700-721
0.005
1
XLOC_001007
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001669
Biotype: transcript isomorph
Gene id: XLOC_001007
Gene Name: XLOC_001007
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
76-90
0.021
4
6mer
589-616
0.004
3
6mer
709-727
0.003
1
SRD5A3-AS1
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000619912
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
457-467
0.023
1
6mer
155-180
0.006
6
FAR2P1
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_026758.1
Biotype: lincRNA
Gene id: NR_026758.1 (gene)
Gene Name: FAR2P1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2168-2182
0.020
3
6mer
4474-4498
0.004
1
7mer
1981-2000
0.004
0
RP11-805I24.1
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563931
Biotype: lincRNA
Gene id: ENSG00000261177
Gene Name: RP11-805I24.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4470-4494
0.007
0
7mer
698-721
0.006
1
9mer
2933-2955
0.005
0
6mer
7048-7072
0.004
1
6mer
2115-2125
0.001
1
6mer
3345-3370
0.001
1
6mer
3876-3902
0.001
0
6mer
4645-4665
0.001
1
6mer
5672-5697
0.001
1
6mer
4202-4219
0.001
0
6mer
3177-3203
0.001
0
NPTN-IT1
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_103844.1
Biotype: sense
Gene id: NR_103844.1 (gene)
Gene Name: NPTN-IT1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
967-983
0.015
3
7mer
479-495
0.006
1
6mer
1984-2007
0.003
1
6mer
1589-1612
0.002
1
6mer
1788-1810
0.001
1
6mer
1742-1753
0.001
1
AC007246.3
hsa-miR-150-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446698
Biotype: antisense
Gene id: ENSG00000231312
Gene Name: AC007246.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
496-521
0.025
3
6mer
166-189
0.003
0
CTD-2313F11.1
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000618221
Biotype: antisense
Gene id: ENSG00000240535
Gene Name: CTD-2313F11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
233-246
0.021
1
7mer
610-631
0.007
1
XLOC_011100
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022830
Biotype: transcript isomorph
Gene id: XLOC_011100
Gene Name: XLOC_011100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7183-7204
0.010
1
8mer
6013-6032
0.006
1
7mer
1796-1815
0.006
1
6mer
7311-7335
0.005
3
6mer
2629-2650
0.002
2
XLOC_010732
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021698
Biotype: transcript isomorph
Gene id: XLOC_010732
Gene Name: XLOC_010732
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
311-337
0.026
1
6mer
595-619
0.002
0
XLOC_007720
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016340
Biotype: transcript isomorph
Gene id: XLOC_007720
Gene Name: XLOC_007720
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
39-60
0.020
Not Conserved
6mer
434-446
0.005
3
6mer
467-484
0.003
0
GRIK1-AS2
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_033368.1
Biotype: sense
Gene id: NR_033368.1 (gene)
Gene Name: GRIK1-AS2
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
211-234
0.019
5
7mer
833-851
0.009
1
LINC00846
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000334165
Biotype: lincRNA
Gene id: ENSG00000186842
Gene Name: LINC00846
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
103-129
0.015
1
7mer
277-287
0.013
0
RP4-671O14.7
hsa-miR-150-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624215
Biotype: antisense
Gene id: ENSG00000280011
Gene Name: RP4-671O14.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
508-531
0.004
1
7mer
9066-9085
0.004
0
7mer
14387-14397
0.003
1
7mer
8564-8574
0.002
0
7mer
9914-9924
0.002
0
7mer
13950-13973
0.002
1
8mer+wobble
14905-14924
0.001
1
7mer
6276-6300
0.001
0
6mer
15228-15246
0.001
2
6mer
12469-12482
0.001
1
6mer
8162-8181
0.001
0
7mer
5716-5726
0.001
Not Conserved
6mer
5801-5822
0.001
Not Conserved
6mer
12175-12198
0.001
0
7mer
6221-6243
0.001
Not Conserved
6mer
8036-8054
0.000
0
RP11-285G1.2
hsa-miR-150-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000436877
Biotype: antisense
Gene id: ENSG00000234504
Gene Name: RP11-285G1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1005-1032
0.014
1
8mer
473-496
0.009
1
6mer
800-818
0.003
0
6mer
721-742
0.002
1
EMX2OS
hsa-miR-150-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000424371
Biotype: antisense
Gene id: ENSG00000229847
Gene Name: EMX2OS
UCSC graphic:
Expression:
  Cell Line Tissue Category
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
98-120
0.015
1
7mer
390-411
0.013
0
XLOC_008063
hsa-miR-150-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017243
Biotype: transcript isomorph
Gene id: XLOC_008063
Gene Name: XLOC_008063
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4553-4570
0.018
4
7mer
3798-3814
0.008
1
6mer
3544-3566
0.002
1
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