LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-346C4.3
hsa-miR-150-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000622038
Biotype: lincRNA
Gene id: ENSG00000274718
Gene Name: RP11-346C4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
570-595
0.029
2
RP11-1096D5.1
hsa-miR-150-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000567801
Biotype: lincRNA
Gene id: ENSG00000260440
Gene Name: RP11-1096D5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-267
0.012
0
7mer
1359-1386
0.003
1
7mer
3066-3092
0.003
1
6mer
4736-4754
0.003
1
6mer
3852-3871
0.002
1
6mer
4261-4285
0.002
1
6mer
4824-4845
0.001
1
6mer
2786-2803
0.001
1
6mer
4537-4557
0.001
0
6mer
1473-1490
0.001
0
XLOC_001045
hsa-miR-150-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001690
Biotype: transcript isomorph
Gene id: XLOC_001045
Gene Name: XLOC_001045
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
25-46
0.016
Not Conserved
7mer
101-106
0.013
0
TTTY16
hsa-miR-150-5p
0.750
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000437686
Biotype: lincRNA
Gene id: ENSG00000225520
Gene Name: TTTY16
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
143-163
0.015
0
6mer
120-135
0.014
0
RP11-94M14.3
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000425365
Biotype: lincRNA
Gene id: ENSG00000238291
Gene Name: RP11-94M14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
446-470
0.024
1
6mer
341-360
0.005
1
RP11-856M7.1
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000562202
Biotype: antisense
Gene id: ENSG00000260779
Gene Name: RP11-856M7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
483-506
0.012
0
7mer
69-94
0.010
0
7mer
1230-1251
0.005
0
7mer
2854-2880
0.002
0
6mer
2347-2368
0.001
0
RP11-444D3.1
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000446891
Biotype: lincRNA
Gene id: ENSG00000255864
Gene Name: RP11-444D3.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
11-33
0.016
3
7mer
26-48
0.013
2
RP11-617F23.2
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000614119
Biotype: sense_intronic
Gene id: ENSG00000273691
Gene Name: RP11-617F23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
968-989
0.023
4
6mer
1037-1041
0.005
2
XLOC_003100
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006498
Biotype: transcript isomorph
Gene id: XLOC_003100
Gene Name: XLOC_003100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1669-1689
0.006
0
7mer
535-545
0.005
0
7mer
1042-1064
0.004
0
6mer
6239-6263
0.004
1
6mer
403-426
0.002
Not Conserved
7mer
5123-5149
0.002
Not Conserved
7mer
2331-2347
0.002
0
6mer
2866-2882
0.001
0
6mer
3522-3537
0.001
0
6mer
2196-2221
0.000
0
CTA-125H2.2
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000595102
Biotype: antisense
Gene id: ENSG00000231933
Gene Name: CTA-125H2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-369
0.029
5
KB-1732A1.1
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517910
Biotype: lincRNA
Gene id: ENSG00000253669
Gene Name: KB-1732A1.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
382-398
0.015
0
7mer
2474-2484
0.009
Not Conserved
6mer
2637-2652
0.003
0
6mer
1720-1735
0.001
0
RP11-284P20.3
hsa-miR-150-5p
0.749
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000442260
Biotype: lincRNA
Gene id: ENSG00000235533
Gene Name: RP11-284P20.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
302-328
0.029
7
XLOC_012579
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00026166
Biotype: transcript isomorph
Gene id: XLOC_012579
Gene Name: XLOC_012579
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2154-2176
0.011
0
7mer
54-64
0.007
1
7mer
981-991
0.004
1
6mer
576-593
0.003
0
6mer
2335-2357
0.002
0
6mer
816-831
0.002
1
RP11-284F21.10
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000605886
Biotype: antisense
Gene id: ENSG00000272405
Gene Name: RP11-284F21.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2934-2948
0.009
1
7mer
2544-2562
0.005
1
7mer
2817-2834
0.005
2
7mer
1344-1370
0.004
1
6mer
59-82
0.003
2
6mer
2459-2463
0.002
2
RP3-522J7.7
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624882
Biotype: antisense
Gene id: ENSG00000279345
Gene Name: RP3-522J7.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
183-207
0.010
0
7mer
1435-1457
0.010
0
7mer
935-957
0.004
1
7mer
1299-1309
0.004
0
XLOC_002925
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006314
Biotype: transcript isomorph
Gene id: XLOC_002925
Gene Name: XLOC_002925
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
404-425
0.028
1
XLOC_011313
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023466
Biotype: transcript isomorph
Gene id: XLOC_011313
Gene Name: XLOC_011313
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
205-230
0.008
1
7mer
1830-1841
0.006
1
7mer
348-365
0.006
1
7mer
1698-1708
0.006
1
6mer
933-959
0.001
Not Conserved
MESTIT1
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_004382.1
Biotype: antisense
Gene id: NR_004382.1 (gene)
Gene Name: MESTIT1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1921-1936
0.015
4
6mer
107-117
0.004
0
7mer
711-733
0.003
0
6mer
2395-2404
0.003
1
6mer
2698-2711
0.002
1
6mer
2741-2767
0.001
1
HCG18
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000602861
Biotype: antisense
Gene id: ENSG00000231074
Gene Name: HCG18
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
63-90
0.022
1
6mer
85-112
0.006
1
PDZRN3-AS1
hsa-miR-150-5p
0.748
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608304
Biotype: antisense
Gene id: ENSG00000239677
Gene Name: PDZRN3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
526-552
0.017
1
7mer
332-347
0.011
4
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