LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_010812
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022486
Biotype: transcript isomorph
Gene id: XLOC_010812
Gene Name: XLOC_010812
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
385-410
0.022
0
6mer
311-334
0.007
0
XLOC_002055
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004213
Biotype: transcript isomorph
Gene id: XLOC_002055
Gene Name: XLOC_002055
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
727-750
0.009
Not Conserved
7mer
383-393
0.007
1
6mer
790-811
0.007
4
7mer
243-253
0.006
1
LINC01455
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503167
Biotype: antisense
Gene id: ENSG00000250888
Gene Name: LINC01455
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
194-212
0.029
4
FZD10-AS1
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505807
Biotype: lincRNA
Gene id: ENSG00000250208
Gene Name: FZD10-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
765-782
0.009
1
6mer
82-101
0.003
1
7mer
3380-3403
0.003
1
6mer
9992-10018
0.003
0
6mer
6245-6257
0.002
1
6mer
5426-5450
0.002
0
6mer
7642-7665
0.001
2
6mer
6047-6073
0.001
1
6mer
8064-8080
0.001
1
6mer
8645-8669
0.001
Not Conserved
6mer
2936-2963
0.001
1
6mer
1746-1773
0.001
0
6mer
4915-4942
0.001
1
6mer
6177-6197
0.000
Not Conserved
EDRF1-AS1
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000615461
Biotype: antisense
Gene id: ENSG00000236991
Gene Name: EDRF1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
502-524
0.026
0
6mer
473-493
0.003
0
RP11-627J17.1
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000607832
Biotype: antisense
Gene id: ENSG00000272149
Gene Name: RP11-627J17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
172-197
0.029
1
XLOC_009813
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020482
Biotype: transcript isomorph
Gene id: XLOC_009813
Gene Name: XLOC_009813
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
329-348
0.021
3
6mer
1917-1942
0.003
0
6mer
47-63
0.003
3
6mer
609-630
0.003
2
DHRS4-AS1
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556379
Biotype: antisense
Gene id: ENSG00000215256
Gene Name: DHRS4-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
284-296
0.022
1
7mer
1872-1897
0.004
1
6mer
2034-2056
0.003
1
CTD-2313F11.1
hsa-miR-150-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000608466
Biotype: antisense
Gene id: ENSG00000240535
Gene Name: CTD-2313F11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
273-286
0.023
1
7mer
650-671
0.006
1
XLOC_005927
hsa-miR-150-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011244
Biotype: transcript isomorph
Gene id: XLOC_005927
Gene Name: XLOC_005927
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
252-272
0.015
1
7mer
2445-2456
0.010
1
6mer
2205-2227
0.002
1
6mer
1631-1648
0.001
1
6mer
1192-1215
0.001
1
RP11-145M4.1
hsa-miR-150-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422198
Biotype: lincRNA
Gene id: ENSG00000241042
Gene Name: RP11-145M4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
131-152
0.029
2
STX18-AS1
hsa-miR-150-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608184
Biotype: antisense
Gene id: ENSG00000247708
Gene Name: STX18-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2418-2442
0.024
1
7mer
870-895
0.005
0
RPARP-AS1
hsa-miR-150-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000597488
Biotype: retained_intron
Gene id: ENSG00000269609
Gene Name: RPARP-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1718-1742
0.021
1
6mer
122-143
0.005
1
6mer
1764-1787
0.003
1
RP11-88I18.2
hsa-miR-150-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000609241
Biotype: antisense
Gene id: ENSG00000233178
Gene Name: RP11-88I18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
144-156
0.017
1
7mer
216-229
0.011
0
AC007283.5
hsa-miR-150-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000434645
Biotype: lincRNA
Gene id: ENSG00000234431
Gene Name: AC007283.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
287-302
0.016
1
7mer
364-384
0.013
1
RP11-139B1.1
hsa-miR-150-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551761
Biotype: lincRNA
Gene id: ENSG00000257476
Gene Name: RP11-139B1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
300-317
0.022
1
6mer
102-113
0.004
0
6mer
189-210
0.004
0
MIR4697HG
hsa-miR-150-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_024344.1
Biotype: lincRNA
Gene id: NR_024344.1 (gene)
Gene Name: MIR4697HG
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4410-4436
0.006
1
7mer
4652-4668
0.004
1
7mer
4086-4104
0.004
1
6mer
5105-5122
0.004
1
7mer
3140-3152
0.003
1
6mer
899-922
0.001
0
6mer
2610-2630
0.001
1
6mer
2336-2351
0.001
0
6mer
823-842
0.001
1
6mer
4203-4227
0.001
0
6mer
2258-2281
0.001
1
7mer
4177-4195
0.001
1
AC159540.1
hsa-miR-150-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000612970
Biotype: lincRNA
Gene id: ENSG00000230606
Gene Name: AC159540.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1016-1032
0.029
0
CTC-459M5.2
hsa-miR-150-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506875
Biotype: antisense
Gene id: ENSG00000251187
Gene Name: CTC-459M5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
163-183
0.029
4
RP11-21B23.2
hsa-miR-150-5p
0.751
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566876
Biotype: lincRNA
Gene id: ENSG00000261092
Gene Name: RP11-21B23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
173-198
0.029
9
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