LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
HAS2-AS1
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522197
Biotype: antisense
Gene id: ENSG00000248690
Gene Name: HAS2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
359-377
0.030
0
MIATNB
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000435162
Biotype: lincRNA
Gene id: ENSG00000244625
Gene Name: MIATNB
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
435-454
0.011
0
7mer
296-318
0.011
1
6mer
180-199
0.005
1
8mer+mismatch
259-280
0.003
1
RP11-555K2.4
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000623559
Biotype: lincRNA
Gene id: ENSG00000279321
Gene Name: RP11-555K2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
371-395
0.030
0
RP11-356J5.12
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000504610
Biotype: lincRNA
Gene id: ENSG00000250303
Gene Name: RP11-356J5.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
324-344
0.009
1
7mer
1940-1954
0.006
2
9mer
393-409
0.005
0
6mer
2676-2693
0.004
1
6mer
533-550
0.003
1
6mer
1581-1600
0.001
2
6mer
1080-1104
0.001
1
RP11-92C4.3
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000589105
Biotype: antisense
Gene id: ENSG00000267026
Gene Name: RP11-92C4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
196-209
0.019
2
7mer
239-255
0.011
1
CTD-2620I22.3
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596769
Biotype: lincRNA
Gene id: ENSG00000267943
Gene Name: CTD-2620I22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2984-2994
0.014
0
7mer
3796-3806
0.010
1
6mer
944-970
0.003
1
6mer
2716-2737
0.003
1
SPACA6P-AS
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000602324
Biotype: lincRNA
Gene id: ENSG00000269959
Gene Name: SPACA6P-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2006-2029
0.017
2
7mer
410-432
0.007
1
7mer
1998-2013
0.002
0
6mer
2653-2674
0.001
3
6mer
3058-3082
0.001
1
6mer
2888-2913
0.001
1
LINC00886
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000472943
Biotype: lincRNA
Gene id: ENSG00000240875
Gene Name: LINC00886
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
849-866
0.019
2
7mer
2902-2925
0.008
2
6mer
766-786
0.002
0
LINC00326
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000434443
Biotype: lincRNA
Gene id: ENSG00000231023
Gene Name: LINC00326
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
724-733
0.018
1
7mer
626-643
0.012
1
LINC01146
hsa-miR-150-5p
0.764
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555996
Biotype: lincRNA
Gene id: ENSG00000258867
Gene Name: LINC01146
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
81-108
0.030
0
ADORA2A-AS1
hsa-miR-150-5p
0.763
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000326341
Biotype: antisense
Gene id: ENSG00000178803
Gene Name: ADORA2A-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2232-2255
0.016
2
6mer
2248-2267
0.007
7
8mer
845-863
0.007
1
RP11-172E9.2
hsa-miR-150-5p
0.763
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000400432
Biotype: lincRNA
Gene id: ENSG00000230058
Gene Name: RP11-172E9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
112-138
0.030
2
RP11-480C16.1
hsa-miR-150-5p
0.763
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608834
Biotype: lincRNA
Gene id: ENSG00000272563
Gene Name: RP11-480C16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2073-2093
0.024
2
7mer
2979-3002
0.004
0
6mer
2993-3015
0.002
0
RP11-706F1.2
hsa-miR-150-5p
0.763
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000504057
Biotype: lincRNA
Gene id: ENSG00000249877
Gene Name: RP11-706F1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37-49
0.026
1
6mer
307-333
0.004
0
RP3-417L20.4
hsa-miR-150-5p
0.763
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000437859
Biotype: antisense
Gene id: ENSG00000235122
Gene Name: RP3-417L20.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
191-204
0.030
0
AY269186.1
hsa-miR-150-5p
0.762
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000440867
Biotype: lincRNA
Gene id: ENSG00000223587
Gene Name: AY269186.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
566-577
0.030
1
LINC00696
hsa-miR-150-5p
0.762
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_027331.1
Biotype: lincRNA
Gene id: NR_027331.1 (gene)
Gene Name: LINC00696
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
324-349
0.009
4
7mer
271-290
0.007
1
6mer
103-128
0.004
0
7mer
1610-1634
0.004
0
6mer
769-793
0.003
7
6mer
822-836
0.002
0
6mer
1299-1322
0.001
2
6mer
1290-1313
0.001
1
FBXO36-IT1
hsa-miR-150-5p
0.762
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000432957
Biotype: sense_intronic
Gene id: ENSG00000231534
Gene Name: FBXO36-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
75-93
0.016
1
7mer
553-572
0.014
1
AC108488.4
hsa-miR-150-5p
0.762
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000438482
Biotype: lincRNA
Gene id: ENSG00000242282
Gene Name: AC108488.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
842-865
0.016
Not Conserved
7mer
488-511
0.014
0
CTD-2561J22.5
hsa-miR-150-5p
0.762
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594557
Biotype: retained_intron
Gene id: ENSG00000268119
Gene Name: CTD-2561J22.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
229-247
0.023
0
7mer
126-149
0.004
Not Conserved
6mer
94-109
0.003
0
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