LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00152
hsa-miR-150-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_024204.1
Biotype: lincRNA
Gene id: NR_024204.1 (gene)
Gene Name: LINC00152
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
490-513
0.030
7
XLOC_008420
hsa-miR-150-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018690
Biotype: transcript isomorph
Gene id: XLOC_008420
Gene Name: XLOC_008420
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2638-2658
0.019
1
7mer
2543-2569
0.012
0
RP11-433J8.1
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553378
Biotype: lincRNA
Gene id: ENSG00000258702
Gene Name: RP11-433J8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
960-977
0.019
3
7mer
2217-2242
0.003
0
6mer
2475-2491
0.003
1
7mer
971-997
0.003
1
7mer
1378-1388
0.002
Not Conserved
6mer
1055-1072
0.001
2
RP11-109D24.1
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562568
Biotype: sense_intronic
Gene id: ENSG00000260600
Gene Name: RP11-109D24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
487-512
0.014
2
8mer
927-946
0.009
0
6mer
1832-1856
0.005
1
6mer
1621-1645
0.003
0
RP3-395M20.7
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000456687
Biotype: antisense
Gene id: ENSG00000225931
Gene Name: RP3-395M20.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1274-1293
0.015
0
6mer
70-90
0.008
1
6mer
163-186
0.007
0
LINC00449
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000366259
Biotype: antisense
Gene id: ENSG00000203441
Gene Name: LINC00449
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
844-863
0.012
1
7mer
15-37
0.006
0
7mer
150-160
0.005
0
6mer
661-679
0.004
1
6mer
691-718
0.004
1
GS1-57L11.1
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520024
Biotype: lincRNA
Gene id: ENSG00000253853
Gene Name: GS1-57L11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
550-560
0.028
1
6mer
30-56
0.003
1
XLOC_010827
hsa-miR-150-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022501
Biotype: transcript isomorph
Gene id: XLOC_010827
Gene Name: XLOC_010827
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
494-520
0.020
1
7mer
582-603
0.006
0
6mer
105-130
0.002
0
6mer
148-170
0.002
0
RP11-760N9.1
hsa-miR-150-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000578427
Biotype: lincRNA
Gene id: ENSG00000264707
Gene Name: RP11-760N9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
283-306
0.027
0
6mer
38-60
0.003
0
LINC00514
hsa-miR-150-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000572266
Biotype: lincRNA
Gene id: ENSG00000262152
Gene Name: LINC00514
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Kidney Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
89-107
0.006
1
6mer
474-495
0.005
7
8mer+wobble
1862-1884
0.004
0
6mer
1835-1860
0.003
0
6mer
1797-1822
0.003
0
6mer
54-78
0.002
0
6mer
1971-1981
0.001
Not Conserved
6mer
1005-1020
0.001
2
6mer
762-781
0.001
0
6mer
1368-1387
0.001
0
6mer
1418-1444
0.001
0
6mer
1159-1184
0.001
0
RP11-57A19.5
hsa-miR-150-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000602838
Biotype: lincRNA
Gene id: ENSG00000270118
Gene Name: RP11-57A19.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
91-101
0.030
0
XLOC_009628
hsa-miR-150-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020283
Biotype: transcript isomorph
Gene id: XLOC_009628
Gene Name: XLOC_009628
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6867-6891
0.010
1
6mer
7027-7049
0.004
2
7mer
3904-3926
0.003
1
7mer
850-867
0.002
Not Conserved
6mer
920-933
0.002
3
7mer
2961-2984
0.002
0
6mer
3377-3402
0.002
1
6mer
1665-1690
0.001
1
6mer
3574-3593
0.001
1
6mer
3659-3678
0.001
4
6mer
2679-2693
0.001
0
6mer
2679-2705
0.000
0
RP11-576I22.2
hsa-miR-150-5p
0.766
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416416
Biotype: antisense
Gene id: ENSG00000231407
Gene Name: RP11-576I22.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
589-603
0.014
1
7mer
633-655
0.011
1
6mer
1841-1859
0.006
4
RP11-46F15.2
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000435049
Biotype: antisense
Gene id: ENSG00000238260
Gene Name: RP11-46F15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
144-164
0.026
2
6mer
12-22
0.004
0
RP11-1379J22.5
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503428
Biotype: antisense
Gene id: ENSG00000250999
Gene Name: RP11-1379J22.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
280-300
0.027
0
6mer
125-141
0.003
0
XLOC_005278
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011803
Biotype: transcript isomorph
Gene id: XLOC_005278
Gene Name: XLOC_005278
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Breast Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3503-3530
0.008
3
7mer
655-679
0.008
4
7mer
3744-3771
0.005
2
7mer
792-818
0.004
1
6mer
1684-1701
0.003
8
6mer
5258-5282
0.001
1
6mer
2133-2153
0.001
4
RP1-257A7.5
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606393
Biotype: lincRNA
Gene id: ENSG00000272379
Gene Name: RP1-257A7.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
269-293
0.013
Not Conserved
6mer
29-46
0.008
4
6mer
154-179
0.005
1
6mer
107-121
0.004
5
CTA-315H11.2
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000619486
Biotype: sense_intronic
Gene id: ENSG00000274080
Gene Name: CTA-315H11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-264
0.008
2
7mer
104-127
0.006
1
7mer
671-681
0.005
3
7mer
1469-1492
0.004
0
6mer
859-873
0.003
4
6mer
939-961
0.002
1
6mer
1301-1327
0.001
1
6mer
708-725
0.001
0
LINC00152
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414584
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
449-472
0.030
7
DISC2
hsa-miR-150-5p
0.765
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_002227.2
Biotype: antisense
Gene id: NR_002227.2 (gene)
Gene Name: DISC2
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3685-3710
0.017
5
6mer
17-36
0.007
1
7mer
2714-2739
0.004
1
6mer
2346-2367
0.002
0
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