LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-799D4.4
hsa-miR-150-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000588697
Biotype: antisense
Gene id: ENSG00000266947
Gene Name: RP11-799D4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
121-144
0.031
1
MIR4500HG
hsa-miR-150-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000436290
Biotype: lincRNA
Gene id: ENSG00000228824
Gene Name: MIR4500HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Kidney Normal/Primary
- Liver Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1440-1453
0.020
1
7mer
1204-1229
0.011
1
RP11-159D12.2
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585065
Biotype: lincRNA
Gene id: ENSG00000264112
Gene Name: RP11-159D12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4434-4460
0.014
1
7mer
1003-1029
0.007
1
6mer
3804-3824
0.004
5
6mer
4252-4278
0.003
1
6mer
579-606
0.003
3
RP11-212P7.2
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608477
Biotype: lincRNA
Gene id: ENSG00000273270
Gene Name: RP11-212P7.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2546-2569
0.006
0
7mer
684-708
0.004
0
7mer
549-576
0.003
0
7mer
4627-4652
0.003
1
7mer
3316-3341
0.002
0
7mer
4125-4150
0.002
0
8mer+wobble
5806-5831
0.002
0
7mer
2881-2891
0.002
0
7mer
3067-3092
0.002
0
6mer
3957-3971
0.001
0
6mer
4762-4787
0.001
1
6mer
1622-1644
0.001
Not Conserved
6mer
1927-1948
0.001
0
7mer
4443-4466
0.001
0
6mer
4480-4490
0.001
0
RP11-495K9.7
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000537280
Biotype: lincRNA
Gene id: ENSG00000256424
Gene Name: RP11-495K9.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
449-471
0.031
0
RP11-104H15.10
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000575331
Biotype: processed_transcript
Gene id: ENSG00000272884
Gene Name: RP11-104H15.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
336-360
0.007
1
7mer
4924-4946
0.005
6
6mer
5505-5524
0.005
0
6mer
5436-5457
0.003
2
6mer
4869-4894
0.003
1
7mer
1801-1818
0.002
1
6mer
4268-4287
0.001
3
6mer
1341-1356
0.001
4
6mer
3020-3036
0.001
0
6mer
1532-1545
0.001
1
6mer
3773-3792
0.001
2
6mer
1347-1374
0.001
2
RP11-363G10.2
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000375625
Biotype: lincRNA
Gene id: ENSG00000179028
Gene Name: RP11-363G10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
805-818
0.017
3
7mer
2256-2276
0.010
1
6mer
2172-2194
0.004
1
FAM95B1
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000610972
Biotype: lincRNA
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
54-78
0.014
0
6mer
933-958
0.010
0
6mer
491-505
0.003
Not Conserved
6mer
179-204
0.002
Not Conserved
6mer
1072-1086
0.002
Not Conserved
RP11-16N2.1
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000398777
Biotype: lincRNA
Gene id: ENSG00000240152
Gene Name: RP11-16N2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
180-207
0.012
0
8mer
310-334
0.012
0
7mer
293-303
0.007
1
LOXL1-AS1
hsa-miR-150-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000567257
Biotype: antisense
Gene id: ENSG00000261801
Gene Name: LOXL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2168-2185
0.031
1
NCK1-AS1
hsa-miR-150-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000474250
Biotype: antisense
Gene id: ENSG00000239213
Gene Name: NCK1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
529-550
0.017
3
7mer
238-260
0.007
2
6mer
642-654
0.007
4
XLOC_012041
hsa-miR-150-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024306
Biotype: transcript isomorph
Gene id: XLOC_012041
Gene Name: XLOC_012041
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
86-109
0.009
1
7mer
3858-3882
0.007
0
9mer
2321-2343
0.004
0
6mer
6436-6460
0.003
1
6mer
1503-1513
0.001
1
6mer
2733-2758
0.001
1
6mer
3264-3290
0.001
0
6mer
4033-4053
0.001
1
6mer
5060-5085
0.001
1
6mer
3590-3607
0.001
0
6mer
2565-2591
0.001
0
XLOC_000199
hsa-miR-150-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000200
Biotype: transcript isomorph
Gene id: XLOC_000199
Gene Name: XLOC_000199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1998-2008
0.029
1
6mer
694-715
0.002
0
XLOC_006738
hsa-miR-150-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015252
Biotype: transcript isomorph
Gene id: XLOC_006738
Gene Name: XLOC_006738
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1717-1734
0.015
1
8mer
1163-1189
0.009
1
6mer
2202-2227
0.002
1
6mer
1825-1847
0.002
1
6mer
1797-1823
0.002
1
XLOC_013387
hsa-miR-150-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027396
Biotype: transcript isomorph
Gene id: XLOC_013387
Gene Name: XLOC_013387
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
179-203
0.027
0
6mer
394-406
0.003
0
NDUFV2-AS1
hsa-miR-150-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000582375
Biotype: antisense
Gene id: ENSG00000266053
Gene Name: NDUFV2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
201-219
0.026
2
6mer
406-429
0.004
0
CD81-AS1
hsa-miR-150-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000413483
Biotype: antisense
Gene id: ENSG00000238184
Gene Name: CD81-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
144-157
0.030
1
XLOC_007089
hsa-miR-150-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015015
Biotype: transcript isomorph
Gene id: XLOC_007089
Gene Name: XLOC_007089
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1169-1191
0.014
1
6mer
1110-1125
0.004
1
6mer
3070-3090
0.003
0
6mer
8424-8441
0.002
0
6mer
6524-6540
0.002
0
7mer
6068-6086
0.002
Not Conserved
7mer
9922-9948
0.002
Not Conserved
6mer
4867-4882
0.001
Not Conserved
6mer
9895-9916
0.001
0
6mer
8856-8876
0.001
Not Conserved
FAM87A
hsa-miR-150-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000330148
Biotype: lincRNA
Gene id: ENSG00000182366
Gene Name: FAM87A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3529-3548
0.012
0
6mer
408-429
0.005
1
7mer
3818-3836
0.004
0
6mer
860-878
0.004
1
6mer
3868-3883
0.003
0
6mer
3378-3400
0.002
1
6mer
3373-3400
0.001
0
RP11-266O8.1
hsa-miR-150-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000543286
Biotype: lincRNA
Gene id: ENSG00000257060
Gene Name: RP11-266O8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
153-171
0.024
5
6mer
165-188
0.004
2
6mer
434-459
0.002
2
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