LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-1137G4.3
hsa-miR-150-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593558
Biotype: antisense
Gene id: ENSG00000268845
Gene Name: RP11-1137G4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
336-362
0.028
0
6mer
356-382
0.003
Not Conserved
RP11-386G11.10
hsa-miR-150-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547712
Biotype: antisense
Gene id: ENSG00000258017
Gene Name: RP11-386G11.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
367-387
0.031
2
RP11-744K17.2
hsa-miR-150-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582527
Biotype: lincRNA
Gene id: ENSG00000266885
Gene Name: RP11-744K17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
226-245
0.031
0
RP11-266O8.1
hsa-miR-150-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000554466
Biotype: lincRNA
Gene id: ENSG00000257060
Gene Name: RP11-266O8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
153-171
0.024
5
6mer
165-188
0.004
2
6mer
434-459
0.003
2
SLC8A1-AS1
hsa-miR-150-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000597385
Biotype: antisense
Gene id: ENSG00000227028
Gene Name: SLC8A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
257-272
0.024
4
7mer
411-425
0.007
0
RP11-907D1.2
hsa-miR-150-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557745
Biotype: lincRNA
Gene id: ENSG00000258393
Gene Name: RP11-907D1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
219-237
0.025
1
6mer
58-74
0.004
1
6mer
524-547
0.003
1
LOC100190986
hsa-miR-150-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: NR_024456.1
Biotype: sense
Gene id: NR_024456.1 (gene)
Gene Name: LOC100190986
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
247-257
0.031
0
MIR663AHG
hsa-miR-150-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000596537
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
504-523
0.020
0
7mer
556-573
0.011
0
KIF25-AS1
hsa-miR-150-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000456585
Biotype: lincRNA
Gene id: ENSG00000229921
Gene Name: KIF25-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
256-276
0.017
1
7mer
2171-2182
0.010
1
6mer
1931-1953
0.002
1
6mer
1357-1374
0.001
1
6mer
1196-1219
0.001
1
CTC-459M5.2
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505825
Biotype: antisense
Gene id: ENSG00000251187
Gene Name: CTC-459M5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
18-38
0.031
4
LINC00491
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508339
Biotype: lincRNA
Gene id: ENSG00000250682
Gene Name: LINC00491
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
46-72
0.015
1
7mer
102-113
0.013
0
6mer
330-343
0.003
0
LOC646471
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_024498.1
Biotype: antisense
Gene id: NR_024498.1 (gene)
Gene Name: LOC646471
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3456-3481
0.014
3
7mer
1657-1680
0.004
Not Conserved
7mer
2828-2838
0.003
0
6mer
2951-2964
0.003
1
7mer
2694-2719
0.002
0
6mer
3440-3462
0.002
0
8mer
1586-1612
0.002
0
6mer
2375-2399
0.001
Not Conserved
EDRF1-AS1
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000594025
Biotype: antisense
Gene id: ENSG00000236991
Gene Name: EDRF1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
295-317
0.028
0
6mer
266-286
0.003
0
ERVK3-1
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590505
Biotype: retained_intron
Gene id: ENSG00000142396
Gene Name: ERVK3-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
3513-3524
0.012
1
7mer
844-862
0.008
0
6mer
2886-2906
0.004
0
6mer
3167-3191
0.004
0
6mer
1669-1693
0.002
0
6mer
1786-1797
0.001
0
6mer
1504-1528
0.001
Not Conserved
RP4-781K5.5
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000441360
Biotype: lincRNA
Gene id: ENSG00000241475
Gene Name: RP4-781K5.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
825-850
0.028
1
6mer
467-487
0.003
1
AC022819.3
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000563495
Biotype: sense_intronic
Gene id: ENSG00000259921
Gene Name: AC022819.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1002-1019
0.013
1
7mer
102-127
0.009
0
6mer
313-330
0.004
2
6mer
70-85
0.003
1
6mer
2862-2878
0.002
2
MZF1-AS1
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000600534
Biotype: antisense
Gene id: ENSG00000267858
Gene Name: MZF1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
246-263
0.016
4
7mer
574-589
0.006
0
6mer
1988-2006
0.003
1
6mer
1630-1645
0.002
1
6mer
1891-1917
0.002
1
6mer
1874-1895
0.002
1
FAM95B1
hsa-miR-150-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000592053
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
53-77
0.014
0
6mer
932-957
0.010
0
6mer
490-504
0.003
Not Conserved
6mer
1071-1085
0.002
Not Conserved
6mer
178-203
0.002
Not Conserved
XLOC_012127
hsa-miR-150-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025321
Biotype: transcript isomorph
Gene id: XLOC_012127
Gene Name: XLOC_012127
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
169-187
0.031
1
EDRF1-AS1
hsa-miR-150-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000593871
Biotype: antisense
Gene id: ENSG00000236991
Gene Name: EDRF1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
509-531
0.028
0
6mer
480-500
0.003
0
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