LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_005821
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012265
Biotype: transcript isomorph
Gene id: XLOC_005821
Gene Name: XLOC_005821
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
444-464
0.022
3
7mer
1076-1095
0.010
1
XLOC_010634
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022035
Biotype: transcript isomorph
Gene id: XLOC_010634
Gene Name: XLOC_010634
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1099-1122
0.021
0
7mer
879-900
0.008
0
6mer
357-375
0.003
1
RP11-177H13.2
hsa-miR-150-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519692
Biotype: antisense
Gene id: ENSG00000253837
Gene Name: RP11-177H13.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3322-3346
0.018
2
7mer
655-676
0.012
1
6mer
2979-3001
0.001
0
FAM138E
hsa-miR-150-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559252
Biotype: lincRNA
Gene id: ENSG00000248893
Gene Name: FAM138E
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
254-276
0.031
3
XLOC_000033
hsa-miR-150-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000003
Biotype: transcript isomorph
Gene id: XLOC_000033
Gene Name: XLOC_000033
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-194
0.021
0
7mer
561-582
0.010
1
PVT1
hsa-miR-150-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522875
Biotype: lincRNA
Gene id: ENSG00000249859
Gene Name: PVT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
633-659
0.018
5
7mer
172-177
0.013
0
RP11-108E14.1
hsa-miR-150-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518687
Biotype: lincRNA
Gene id: ENSG00000253300
Gene Name: RP11-108E14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
274-297
0.022
6
7mer
305-324
0.010
1
CTD-3051D23.4
hsa-miR-150-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553344
Biotype: lincRNA
Gene id: ENSG00000258593
Gene Name: CTD-3051D23.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
484-506
0.012
0
7mer
149-172
0.009
0
7mer
632-642
0.008
0
6mer
117-132
0.003
Not Conserved
RP11-475O6.1
hsa-miR-150-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000417975
Biotype: lincRNA
Gene id: ENSG00000233008
Gene Name: RP11-475O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
191-216
0.019
1
7mer
607-623
0.010
0
6mer
176-196
0.003
0
RP11-16E18.3
hsa-miR-150-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000569835
Biotype: lincRNA
Gene id: ENSG00000261542
Gene Name: RP11-16E18.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
725-731
0.026
1
6mer
365-374
0.005
1
LINC01000
hsa-miR-150-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_024368.1
Biotype: lincRNA
Gene id: NR_024368.1 (gene)
Gene Name: LINC01000
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5120-5135
0.005
0
7mer
7019-7040
0.004
0
8mer
4438-4455
0.004
1
7mer
9389-9407
0.003
0
8mer
6233-6257
0.003
0
7mer
6325-6345
0.003
0
7mer
4812-4822
0.002
0
7mer
3112-3136
0.002
0
6mer
9046-9063
0.001
0
6mer
8745-8755
0.001
0
6mer
2980-3005
0.001
0
6mer
5784-5809
0.001
0
6mer
5370-5392
0.001
0
6mer
3213-3228
0.000
Not Conserved
6mer
3048-3073
0.000
0
6mer
3221-3235
0.000
0
6mer
3010-3030
0.000
Not Conserved
XLOC_007591
hsa-miR-150-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016201
Biotype: transcript isomorph
Gene id: XLOC_007591
Gene Name: XLOC_007591
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
454-476
0.023
2
6mer
765-790
0.004
1
6mer
302-325
0.004
1
XLOC_000782
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001452
Biotype: transcript isomorph
Gene id: XLOC_000782
Gene Name: XLOC_000782
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1825-1847
0.012
0
6mer
2057-2080
0.010
0
6mer
577-602
0.009
0
XLOC_001199
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001815
Biotype: transcript isomorph
Gene id: XLOC_001199
Gene Name: XLOC_001199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4567-4589
0.014
1
6mer
23-44
0.004
3
7mer
2130-2143
0.004
1
7mer
1642-1661
0.004
3
7mer
1991-2010
0.002
Not Conserved
6mer
4347-4365
0.002
2
6mer
2198-2221
0.001
3
RP11-1114A5.4
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000435597
Biotype: lincRNA
Gene id: ENSG00000232611
Gene Name: RP11-1114A5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
801-823
0.012
0
7mer
104-127
0.006
0
7mer
239-249
0.005
0
7mer
2268-2291
0.004
0
7mer
1214-1236
0.002
0
6mer
2101-2127
0.002
0
RP5-899B16.1
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000414038
Biotype: lincRNA
Gene id: ENSG00000231426
Gene Name: RP5-899B16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
344-361
0.031
8
AC002398.12
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587767
Biotype: antisense
Gene id: ENSG00000267328
Gene Name: AC002398.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10-30
0.023
0
7mer
247-267
0.004
1
6mer
47-69
0.004
2
C14orf182
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000533506
Biotype: lincRNA
Gene id: ENSG00000214900
Gene Name: C14orf182
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
308-331
0.010
0
7mer
947-966
0.009
1
6mer
1242-1263
0.007
4
8mer
159-183
0.006
0
AC107081.5
hsa-miR-150-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000425779
Biotype: antisense
Gene id: ENSG00000236498
Gene Name: AC107081.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
47-61
0.031
0
CTD-2260A17.1
hsa-miR-150-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512856
Biotype: antisense
Gene id: ENSG00000248734
Gene Name: CTD-2260A17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
372-391
0.012
1
7mer
629-655
0.010
1
6mer
935-954
0.009
8
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