LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LOC100506746
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_038841.1
Biotype: sense
Gene id: NR_038841.1 (gene)
Gene Name: LOC100506746
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
579-589
0.018
1
7mer
1241-1251
0.005
1
7mer
449-455
0.004
0
7mer
417-443
0.003
0
6mer
1072-1089
0.002
1
FTX
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000430772
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
437-456
0.032
2
LINC00689
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000438049
Biotype: antisense
Gene id: ENSG00000231419
Gene Name: LINC00689
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3588-3604
0.021
0
6mer
345-367
0.004
1
6mer
3858-3876
0.004
1
6mer
2430-2455
0.001
1
6mer
1913-1931
0.001
1
6mer
2525-2537
0.001
0
CTD-2260A17.1
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000602972
Biotype: antisense
Gene id: ENSG00000248734
Gene Name: CTD-2260A17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
189-208
0.013
1
7mer
446-472
0.010
1
6mer
753-772
0.008
8
RP11-318A15.2
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000565271
Biotype: antisense
Gene id: ENSG00000261335
Gene Name: RP11-318A15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
60-80
0.023
1
8mer
520-539
0.009
0
RP11-92C4.3
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000589257
Biotype: antisense
Gene id: ENSG00000267026
Gene Name: RP11-92C4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
53-72
0.032
1
RP11-731K22.1
hsa-miR-150-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000567919
Biotype: lincRNA
Gene id: ENSG00000261467
Gene Name: RP11-731K22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2717-2732
0.010
1
7mer
1773-1791
0.007
1
7mer
191-216
0.006
0
7mer
764-787
0.006
1
6mer
1594-1612
0.002
2
RP11-492E3.2
hsa-miR-150-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000443993
Biotype: antisense
Gene id: ENSG00000227619
Gene Name: RP11-492E3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
461-479
0.025
3
6mer
2183-2206
0.005
0
6mer
1276-1290
0.002
2
RP11-83N9.6
hsa-miR-150-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000617896
Biotype: lincRNA
Gene id: ENSG00000275329
Gene Name: RP11-83N9.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1509-1521
0.008
0
7mer
608-628
0.007
0
7mer
1061-1081
0.005
1
6mer
1643-1667
0.005
1
6mer
1698-1717
0.004
0
6mer
119-124
0.003
0
AC007386.2
hsa-miR-150-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449259
Biotype: lincRNA
Gene id: ENSG00000237638
Gene Name: AC007386.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
597-618
0.008
0
7mer
72-97
0.006
1
7mer
629-638
0.005
1
6mer
368-372
0.004
0
6mer
2768-2782
0.003
1
7mer
496-519
0.003
0
6mer
985-1004
0.002
0
6mer
1893-1907
0.002
1
RP11-356C4.3
hsa-miR-150-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562203
Biotype: lincRNA
Gene id: ENSG00000260507
Gene Name: RP11-356C4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
327-337
0.032
0
XLOC_008768
hsa-miR-150-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018466
Biotype: transcript isomorph
Gene id: XLOC_008768
Gene Name: XLOC_008768
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
138-153
0.032
1
NCK1-AS1
hsa-miR-150-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000461864
Biotype: antisense
Gene id: ENSG00000239213
Gene Name: NCK1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
908-929
0.020
3
7mer
703-725
0.006
2
6mer
1021-1033
0.006
4
XLOC_008451
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018161
Biotype: transcript isomorph
Gene id: XLOC_008451
Gene Name: XLOC_008451
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
57-80
0.032
1
RP11-923I11.6
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000562343
Biotype: lincRNA
Gene id: ENSG00000261586
Gene Name: RP11-923I11.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1603-1623
0.017
4
7mer
789-813
0.006
3
6mer
2016-2037
0.004
1
6mer
1966-1991
0.003
1
6mer
177-195
0.002
1
HOTAIRM1
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000429611
Biotype: antisense
Gene id: ENSG00000233429
Gene Name: HOTAIRM1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
545-568
0.030
7
6mer
195-209
0.002
4
RP5-1166F10.1
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000423197
Biotype: lincRNA
Gene id: ENSG00000235054
Gene Name: RP5-1166F10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-194
0.021
0
7mer
561-582
0.010
1
RP5-1166F10.1
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_027088.1
Biotype: lincRNA
Gene id: NR_027088.1 (gene)
Gene Name: RP5-1166F10.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-194
0.021
0
7mer
561-582
0.010
1
RP11-85F14.5
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_110177.1
Biotype: antisense
Gene id: NR_110177.1 (gene)
Gene Name: RP11-85F14.5
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
658-679
0.019
3
6mer
771-783
0.006
4
7mer
453-475
0.006
2
CTA-929C8.9
hsa-miR-150-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624278
Biotype: sense_intronic
Gene id: ENSG00000279185
Gene Name: CTA-929C8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
22120-22136
0.006
1
7mer
20297-20318
0.005
0
7mer
3214-3233
0.004
1
7mer
18148-18165
0.004
2
6mer
1554-1576
0.002
1
6mer
23574-23589
0.002
1
6mer
4915-4940
0.002
1
6mer
18564-18581
0.001
0
6mer
2366-2390
0.001
1
6mer
1804-1819
0.001
1
7mer
1640-1650
0.001
1
6mer
5734-5755
0.001
0
6mer
16978-17004
0.001
1
6mer
13653-13679
0.001
0
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