LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_011794
hsa-miR-150-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024473
Biotype: transcript isomorph
Gene id: XLOC_011794
Gene Name: XLOC_011794
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
293-320
0.024
1
6mer
706-719
0.005
1
6mer
407-430
0.003
1
AC018890.6
hsa-miR-150-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000442996
Biotype: antisense
Gene id: ENSG00000236449
Gene Name: AC018890.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1780-1801
0.015
1
7mer
814-840
0.005
1
6mer
96-104
0.004
1
7mer
692-709
0.004
0
6mer
2116-2139
0.004
0
IGFBP7-AS1
hsa-miR-150-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508328
Biotype: antisense
Gene id: ENSG00000245067
Gene Name: IGFBP7-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
248-262
0.027
2
6mer
610-625
0.005
1
RP6-24A23.3
hsa-miR-150-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000436013
Biotype: antisense
Gene id: ENSG00000237863
Gene Name: RP6-24A23.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
82-104
0.032
2
DLX6-AS1
hsa-miR-150-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000430027
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6373-6385
0.009
0
7mer
9811-9822
0.007
4
7mer
7441-7466
0.005
2
6mer
717-742
0.003
1
6mer
14551-14559
0.002
1
6mer
12247-12265
0.002
0
6mer
9491-9507
0.002
1
7mer
11889-11914
0.001
0
6mer
13374-13399
0.001
1
6mer
11758-11783
0.001
0
6mer
11681-11706
0.001
1
RP11-624L4.2
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560552
Biotype: lincRNA
Gene id: ENSG00000259269
Gene Name: RP11-624L4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
52-74
0.032
5
CTA-992D9.7
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000430468
Biotype: lincRNA
Gene id: ENSG00000231405
Gene Name: CTA-992D9.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
376-396
0.020
1
7mer
333-347
0.013
0
CTD-2619J13.19
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595059
Biotype: lincRNA
Gene id: ENSG00000269473
Gene Name: CTD-2619J13.19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
379-393
0.011
1
7mer
5121-5131
0.009
1
7mer
930-951
0.005
2
7mer
4943-4963
0.004
1
6mer
843-870
0.001
2
6mer
1573-1590
0.001
1
6mer
720-743
0.001
2
XLOC_002675
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006865
Biotype: transcript isomorph
Gene id: XLOC_002675
Gene Name: XLOC_002675
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
732-738
0.032
1
LOXL1-AS1
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000564963
Biotype: antisense
Gene id: ENSG00000261801
Gene Name: LOXL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
439-456
0.032
1
RP11-1069G10.1
hsa-miR-150-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558888
Biotype: antisense
Gene id: ENSG00000259370
Gene Name: RP11-1069G10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
418-435
0.013
0
7mer
7236-7254
0.007
2
7mer
3201-3227
0.006
4
6mer
7161-7180
0.003
0
6mer
2851-2870
0.002
1
6mer
1824-1838
0.001
1
6mer
2103-2129
0.001
1
RP11-108M9.6
hsa-miR-150-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000606899
Biotype: lincRNA
Gene id: ENSG00000272426
Gene Name: RP11-108M9.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
260-274
0.032
0
RP1-74M1.3
hsa-miR-150-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610135
Biotype: lincRNA
Gene id: ENSG00000272796
Gene Name: RP1-74M1.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4601-4625
0.014
1
8mer
3655-3680
0.006
2
6mer
564-582
0.004
4
6mer
112-139
0.003
1
7mer
2791-2811
0.001
0
8mer+mismatch
1667-1689
0.001
2
6mer
3332-3341
0.001
2
6mer
3874-3895
0.001
0
RP11-153K16.1
hsa-miR-150-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541288
Biotype: lincRNA
Gene id: ENSG00000256321
Gene Name: RP11-153K16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
454-468
0.032
0
CTC-479C5.6
hsa-miR-150-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000574912
Biotype: antisense
Gene id: ENSG00000263201
Gene Name: CTC-479C5.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
661-681
0.028
1
6mer
991-1006
0.004
4
LY86-AS1
hsa-miR-150-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000447858
Biotype: antisense
Gene id: ENSG00000216863
Gene Name: LY86-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
93-114
0.023
2
6mer
154-166
0.005
4
6mer
50-74
0.004
1
RP5-1073O3.2
hsa-miR-150-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000429398
Biotype: antisense
Gene id: ENSG00000231128
Gene Name: RP5-1073O3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
714-734
0.013
1
7mer
608-627
0.012
1
6mer
108-126
0.004
2
6mer
619-644
0.003
1
RAMP2-AS1
hsa-miR-150-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591082
Biotype: lincRNA
Gene id: ENSG00000197291
Gene Name: RAMP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
373-388
0.021
1
7mer
224-250
0.011
1
FTX
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000418855
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
301-320
0.032
2
XLOC_003211
hsa-miR-150-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006604
Biotype: transcript isomorph
Gene id: XLOC_003211
Gene Name: XLOC_003211
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13-32
0.032
2
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