LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-444P10.1
hsa-miR-150-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000460597
Biotype: lincRNA
Gene id: ENSG00000241667
Gene Name: RP11-444P10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
359-378
0.025
0
6mer
160-185
0.004
3
6mer
465-486
0.003
2
FTX
hsa-miR-150-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000455395
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
241-260
0.033
2
RP11-753D20.4
hsa-miR-150-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000563140
Biotype: lincRNA
Gene id: ENSG00000259998
Gene Name: RP11-753D20.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2321-2340
0.016
1
6mer
722-749
0.003
5
6mer
579-600
0.003
1
6mer
2094-2111
0.003
1
6mer
1238-1256
0.002
4
6mer
1768-1790
0.002
0
6mer
795-818
0.002
0
6mer
1095-1114
0.001
0
FAM138B
hsa-miR-150-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446648
Biotype: lincRNA
Gene id: ENSG00000226516
Gene Name: FAM138B
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
262-284
0.027
4
6mer
1027-1047
0.004
0
6mer
894-919
0.002
0
RP11-60A8.1
hsa-miR-150-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513280
Biotype: lincRNA
Gene id: ENSG00000249743
Gene Name: RP11-60A8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
168-192
0.033
8
RP11-794P6.1
hsa-miR-150-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528614
Biotype: sense_intronic
Gene id: ENSG00000255428
Gene Name: RP11-794P6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
371-396
0.022
6
7mer
2201-2222
0.009
3
6mer
214-237
0.002
1
ADAMTSL4-AS1
hsa-miR-150-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000617352
Biotype: antisense
Gene id: ENSG00000203804
Gene Name: ADAMTSL4-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
203-217
0.022
4
7mer
433-457
0.010
1
FAM95B1
hsa-miR-150-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000618309
Biotype: retained_intron
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
615-642
0.008
0
7mer
4331-4346
0.007
Not Conserved
6mer
525-550
0.004
0
7mer
775-801
0.003
Not Conserved
7mer
3651-3661
0.003
Not Conserved
7mer
2631-2654
0.002
Not Conserved
6mer
2052-2079
0.002
0
7mer
3770-3795
0.002
Not Conserved
6mer
1033-1047
0.001
Not Conserved
6mer
1843-1858
0.001
Not Conserved
HOTAIRM1
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000593300
Biotype: antisense
Gene id: ENSG00000233429
Gene Name: HOTAIRM1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
171-194
0.032
7
AC142119.1
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000412381
Biotype: lincRNA
Gene id: ENSG00000236989
Gene Name: AC142119.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
286-309
0.029
0
6mer
492-507
0.003
1
ZNRD1-AS1
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000425604
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1667-1688
0.032
0
FAM95B1
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000592873
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
614-641
0.008
0
7mer
4330-4345
0.007
Not Conserved
6mer
524-549
0.004
0
7mer
774-800
0.003
Not Conserved
7mer
3650-3660
0.003
Not Conserved
7mer
2630-2653
0.002
Not Conserved
6mer
2051-2078
0.002
0
7mer
3769-3794
0.002
Not Conserved
6mer
1032-1046
0.001
Not Conserved
6mer
1842-1857
0.001
Not Conserved
AC015923.1
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000431604
Biotype: antisense
Gene id: ENSG00000226797
Gene Name: AC015923.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
232-243
0.032
1
CTD-2521M24.8
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597028
Biotype: antisense
Gene id: ENSG00000269053
Gene Name: CTD-2521M24.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
425-450
0.027
0
7mer
373-398
0.005
0
AC104134.2
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413234
Biotype: antisense
Gene id: ENSG00000225420
Gene Name: AC104134.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1579-1596
0.030
3
7mer
593-605
0.003
0
RP11-586D19.2
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507424
Biotype: lincRNA
Gene id: ENSG00000251408
Gene Name: RP11-586D19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3919-3939
0.013
2
7mer
4034-4048
0.009
1
6mer
138-159
0.005
1
6mer
468-491
0.002
Not Conserved
6mer
3107-3127
0.002
1
6mer
1802-1824
0.001
1
RP11-13N13.5
hsa-miR-150-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584148
Biotype: sense_intronic
Gene id: ENSG00000264188
Gene Name: RP11-13N13.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
141-151
0.032
0
LINC00963
hsa-miR-150-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000419300
Biotype: lincRNA
Gene id: ENSG00000204054
Gene Name: LINC00963
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7181-7197
0.015
1
7mer
8523-8539
0.007
0
7mer
1035-1059
0.006
1
7mer
4269-4294
0.002
0
6mer
5328-5348
0.002
0
7mer
5434-5444
0.001
0
CD81-AS1
hsa-miR-150-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000427151
Biotype: antisense
Gene id: ENSG00000238184
Gene Name: CD81-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
144-157
0.032
1
AJ239322.1
hsa-miR-150-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419362
Biotype: lincRNA
Gene id: ENSG00000235615
Gene Name: AJ239322.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
285-305
0.032
4
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