LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013461
hsa-miR-150-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028105
Biotype: transcript isomorph
Gene id: XLOC_013461
Gene Name: XLOC_013461
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
600-613
0.033
Not Conserved
LOXL1-AS1
hsa-miR-150-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000567644
Biotype: antisense
Gene id: ENSG00000261801
Gene Name: LOXL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
524-541
0.033
1
XLOC_005137
hsa-miR-150-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011255
Biotype: transcript isomorph
Gene id: XLOC_005137
Gene Name: XLOC_005137
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
386-392
0.033
1
TPT1-AS1
hsa-miR-150-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000434849
Biotype: retained_intron
Gene id: ENSG00000170919
Gene Name: TPT1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
440-467
0.014
3
7mer
346-371
0.006
0
7mer
817-827
0.005
1
7mer
940-963
0.004
0
7mer
1224-1234
0.003
0
6mer
540-561
0.002
0
AC004158.3
hsa-miR-150-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564508
Biotype: lincRNA
Gene id: ENSG00000260664
Gene Name: AC004158.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
779-802
0.010
5
7mer
1889-1915
0.008
7
6mer
1180-1198
0.003
12
6mer
3432-3455
0.003
6
6mer
3797-3822
0.002
1
6mer
1509-1527
0.002
8
6mer
3809-3831
0.002
6
6mer
1220-1244
0.002
9
6mer
3239-3263
0.001
7
6mer
1018-1040
0.001
0
6mer
1323-1346
0.001
5
RP1-140K8.1
hsa-miR-150-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000450255
Biotype: lincRNA
Gene id: ENSG00000233068
Gene Name: RP1-140K8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
386-392
0.033
1
XLOC_010870
hsa-miR-150-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00023015
Biotype: transcript isomorph
Gene id: XLOC_010870
Gene Name: XLOC_010870
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
965-990
0.014
1
7mer
7-28
0.012
1
8mer
502-512
0.008
Not Conserved
RP1-288L1.5
hsa-miR-150-5p
0.797
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000423712
Biotype: lincRNA
Gene id: ENSG00000234891
Gene Name: RP1-288L1.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
456-481
0.033
1
CTD-2410N18.4
hsa-miR-150-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000518409
Biotype: processed_transcript
Gene id: ENSG00000273345
Gene Name: CTD-2410N18.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28-43
0.033
9
XLOC_002323
hsa-miR-150-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004445
Biotype: transcript isomorph
Gene id: XLOC_002323
Gene Name: XLOC_002323
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
217-244
0.015
1
7mer
352-362
0.014
1
6mer
185-202
0.004
1
AC013733.4
hsa-miR-150-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449835
Biotype: lincRNA
Gene id: ENSG00000225570
Gene Name: AC013733.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
106-122
0.018
2
7mer
553-568
0.015
Not Conserved
RP11-555K2.4
hsa-miR-150-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000624226
Biotype: lincRNA
Gene id: ENSG00000279321
Gene Name: RP11-555K2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
525-549
0.033
0
FAM138B
hsa-miR-150-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000432583
Biotype: lincRNA
Gene id: ENSG00000226516
Gene Name: FAM138B
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
262-284
0.027
4
6mer
1129-1149
0.004
0
6mer
996-1021
0.002
0
LINC01187
hsa-miR-150-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506431
Biotype: lincRNA
Gene id: ENSG00000249601
Gene Name: LINC01187
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
683-708
0.030
1
6mer
1355-1367
0.003
1
XLOC_003882
hsa-miR-150-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008436
Biotype: transcript isomorph
Gene id: XLOC_003882
Gene Name: XLOC_003882
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
918-945
0.019
1
7mer
2735-2758
0.010
2
6mer
1677-1699
0.002
0
6mer
2132-2152
0.002
0
PWRN2
hsa-miR-150-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000567246
Biotype: lincRNA
Gene id: ENSG00000260551
Gene Name: PWRN2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1313-1332
0.013
1
6mer
270-291
0.007
1
7mer
493-516
0.005
0
6mer
899-923
0.004
1
6mer
746-764
0.003
Not Conserved
RP11-473L15.3
hsa-miR-150-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510758
Biotype: lincRNA
Gene id: ENSG00000249203
Gene Name: RP11-473L15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
190-208
0.017
1
7mer
140-157
0.010
1
7mer
257-279
0.005
1
FAM212B-AS1
hsa-miR-150-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000430373
Biotype: antisense
Gene id: ENSG00000227811
Gene Name: FAM212B-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1940-1954
0.011
1
7mer
895-917
0.009
1
7mer
188-214
0.007
0
7mer
1075-1081
0.003
1
6mer
202-224
0.002
1
XLOC_007773
hsa-miR-150-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016402
Biotype: transcript isomorph
Gene id: XLOC_007773
Gene Name: XLOC_007773
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1757-1781
0.009
2
7mer
525-535
0.007
1
7mer
1469-1494
0.007
0
7mer
358-384
0.005
Not Conserved
6mer
1416-1438
0.003
2
6mer
1308-1327
0.002
1
XLOC_006710
hsa-miR-150-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014462
Biotype: transcript isomorph
Gene id: XLOC_006710
Gene Name: XLOC_006710
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
683-705
0.028
12
6mer
1146-1165
0.003
0
6mer
266-290
0.002
3
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