LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_004924
hsa-miR-150-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010403
Biotype: transcript isomorph
Gene id: XLOC_004924
Gene Name: XLOC_004924
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
122-144
0.008
1
7mer
4112-4126
0.004
0
7mer
2400-2410
0.003
1
7mer
3098-3120
0.003
0
7mer
3976-3997
0.002
1
7mer
5758-5781
0.002
1
7mer
1511-1521
0.002
1
7mer
1345-1360
0.002
0
6mer
5590-5615
0.002
1
7mer
8113-8123
0.001
1
6mer
6862-6879
0.001
1
6mer
8204-8220
0.001
0
6mer
7977-8000
0.001
1
STARD13-AS
hsa-miR-150-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000588966
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
377-397
0.034
1
RP11-96L14.7
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000444682
Biotype: antisense
Gene id: ENSG00000236782
Gene Name: RP11-96L14.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
375-392
0.020
5
8mer
354-366
0.014
3
STARD13-AS
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000589800
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
377-397
0.034
1
LA16c-381G6.1
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000561511
Biotype: lincRNA
Gene id: ENSG00000260532
Gene Name: LA16c-381G6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1665-1686
0.032
1
6mer
1494-1515
0.001
Not Conserved
AC142119.1
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000428280
Biotype: lincRNA
Gene id: ENSG00000236989
Gene Name: AC142119.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
525-548
0.026
0
7mer
279-289
0.005
0
6mer
731-754
0.003
0
LINC00152
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413202
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
103-126
0.034
7
RP11-161H23.9
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000553259
Biotype: antisense
Gene id: ENSG00000258334
Gene Name: RP11-161H23.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
65-91
0.019
2
6mer
105-126
0.005
1
6mer
3939-3954
0.004
1
7mer
724-741
0.003
0
6mer
2103-2124
0.002
4
6mer
783-805
0.002
4
MIR4435-1HG
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000308604
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
291-308
0.034
6
MIR4453
hsa-miR-150-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000604157
Biotype: lincRNA
Gene id: ENSG00000268471
Gene Name: MIR4453
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
709-734
0.013
2
7mer
198-223
0.010
1
6mer
2913-2933
0.007
4
6mer
339-363
0.003
1
XLOC_000267
hsa-miR-150-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000238
Biotype: transcript isomorph
Gene id: XLOC_000267
Gene Name: XLOC_000267
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
69-79
0.017
1
7mer
288-314
0.017
1
MIR4313
hsa-miR-150-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561777
Biotype: lincRNA
Gene id: ENSG00000261043
Gene Name: MIR4313
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2859-2877
0.017
1
7mer
1176-1187
0.006
0
6mer
1148-1160
0.004
1
6mer
916-942
0.003
1
6mer
1008-1026
0.002
0
RP11-88H10.3
hsa-miR-150-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000494509
Biotype: lincRNA
Gene id: ENSG00000240095
Gene Name: RP11-88H10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
210-237
0.028
2
6mer
437-454
0.006
2
CTD-2162K18.4
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000591531
Biotype: lincRNA
Gene id: ENSG00000267260
Gene Name: CTD-2162K18.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
202-218
0.029
0
6mer
255-272
0.004
1
OTX2-AS1
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554725
Biotype: lincRNA
Gene id: ENSG00000248550
Gene Name: OTX2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
354-380
0.033
3
RP11-90B9.2
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560450
Biotype: sense_intronic
Gene id: ENSG00000259767
Gene Name: RP11-90B9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
59-79
0.028
1
7mer
244-269
0.006
0
TNK2-AS1
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000458180
Biotype: antisense
Gene id: ENSG00000224614
Gene Name: TNK2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1683-1708
0.031
1
6mer
233-251
0.002
2
XLOC_002498
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004594
Biotype: transcript isomorph
Gene id: XLOC_002498
Gene Name: XLOC_002498
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
535-551
0.017
0
6mer
152-165
0.004
0
7mer
2443-2456
0.004
2
6mer
429-453
0.004
0
6mer
386-410
0.002
0
6mer
2553-2571
0.002
1
6mer
1520-1531
0.001
0
RP4-726F1.1
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000415629
Biotype: lincRNA
Gene id: ENSG00000235011
Gene Name: RP4-726F1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
69-79
0.017
1
7mer
287-313
0.016
1
RP11-307E17.8
hsa-miR-150-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000454869
Biotype: lincRNA
Gene id: ENSG00000232063
Gene Name: RP11-307E17.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1663-1688
0.012
2
7mer
2032-2055
0.006
0
7mer
1911-1921
0.005
0
7mer
1488-1506
0.004
Not Conserved
6mer
1413-1429
0.002
1
6mer
1495-1514
0.002
2
6mer
44-63
0.002
1
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