LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP1-140K8.1
hsa-miR-150-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000445883
Biotype: lincRNA
Gene id: ENSG00000233068
Gene Name: RP1-140K8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
396-402
0.034
1
RP11-336K24.12
hsa-miR-150-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610146
Biotype: antisense
Gene id: ENSG00000273002
Gene Name: RP11-336K24.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2022-2032
0.014
1
7mer
2094-2114
0.008
1
6mer
178-200
0.006
2
7mer
1018-1023
0.003
1
6mer
1231-1245
0.002
2
6mer
1254-1274
0.001
3
XLOC_011292
hsa-miR-150-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023265
Biotype: transcript isomorph
Gene id: XLOC_011292
Gene Name: XLOC_011292
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
629-655
0.018
5
7mer
628-647
0.006
Not Conserved
6mer
821-847
0.004
5
6mer
1417-1430
0.002
0
6mer
1423-1443
0.002
1
6mer
1445-1462
0.002
0
CTC-241F20.4
hsa-miR-150-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000600941
Biotype: lincRNA
Gene id: ENSG00000268186
Gene Name: CTC-241F20.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
130-147
0.034
1
CTD-2014B16.3
hsa-miR-150-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554907
Biotype: lincRNA
Gene id: ENSG00000258847
Gene Name: CTD-2014B16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
343-361
0.019
1
7mer
619-636
0.009
1
6mer
96-106
0.006
0
RP11-981G7.1
hsa-miR-150-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000562242
Biotype: sense_overlapping
Gene id: ENSG00000261451
Gene Name: RP11-981G7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
677-698
0.020
2
7mer
3780-3802
0.006
1
6mer
4420-4440
0.005
2
7mer
2166-2176
0.002
0
6mer
692-717
0.001
0
6mer
2166-2190
0.000
0
LINC00174
hsa-miR-150-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000416572
Biotype: lincRNA
Gene id: ENSG00000179406
Gene Name: LINC00174
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
100-119
0.034
1
MIATNB
hsa-miR-150-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000440816
Biotype: lincRNA
Gene id: ENSG00000244625
Gene Name: MIATNB
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
518-537
0.015
0
7mer
287-309
0.012
1
6mer
171-190
0.004
1
8mer+mismatch
250-271
0.003
1
XLOC_012421
hsa-miR-150-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025591
Biotype: transcript isomorph
Gene id: XLOC_012421
Gene Name: XLOC_012421
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
153-169
0.034
1
RP11-10H3.1
hsa-miR-150-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519828
Biotype: lincRNA
Gene id: ENSG00000253474
Gene Name: RP11-10H3.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
95-107
0.034
0
BAIAP2-AS1
hsa-miR-150-5p
0.806
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000573167
Biotype: lincRNA
Gene id: ENSG00000226137
Gene Name: BAIAP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
984-1009
0.013
1
7mer
229-254
0.007
1
7mer
783-808
0.006
1
7mer
3723-3747
0.005
1
6mer
3966-3990
0.002
0
6mer
1604-1618
0.001
0
XLOC_000678
hsa-miR-150-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000075
Biotype: transcript isomorph
Gene id: XLOC_000678
Gene Name: XLOC_000678
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
98-108
0.015
1
6mer
2669-2687
0.006
2
6mer
219-235
0.004
1
7mer
1592-1611
0.003
0
6mer
2765-2785
0.002
0
6mer
1786-1811
0.001
Not Conserved
6mer
1566-1591
0.001
1
6mer
1512-1535
0.001
1
RAMP2-AS1
hsa-miR-150-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_024462.1
Biotype: antisense
Gene id: NR_024462.1 (gene)
Gene Name: RAMP2-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1203-1218
0.018
1
7mer
1054-1080
0.007
1
7mer
352-379
0.006
0
6mer
74-89
0.004
1
XLOC_005787
hsa-miR-150-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012230
Biotype: transcript isomorph
Gene id: XLOC_005787
Gene Name: XLOC_005787
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3107-3126
0.023
0
7mer
3045-3065
0.010
2
6mer
1631-1640
0.002
1
HOXA-AS2
hsa-miR-150-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000524048
Biotype: antisense
Gene id: ENSG00000253552
Gene Name: HOXA-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-29
0.017
4
7mer
89-101
0.013
1
6mer
73-94
0.004
1
RP11-215G15.5
hsa-miR-150-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607560
Biotype: lincRNA
Gene id: ENSG00000272016
Gene Name: RP11-215G15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3533-3557
0.028
1
6mer
41-54
0.004
2
6mer
849-873
0.001
1
6mer
1779-1800
0.001
1
RNASEH2B-AS1
hsa-miR-150-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000594244
Biotype: antisense
Gene id: ENSG00000233672
Gene Name: RNASEH2B-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
410-429
0.034
1
RP5-899B16.1
hsa-miR-150-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000431609
Biotype: lincRNA
Gene id: ENSG00000231426
Gene Name: RP5-899B16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
249-266
0.034
8
RP13-554M15.8
hsa-miR-150-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000613771
Biotype: lincRNA
Gene id: ENSG00000277186
Gene Name: RP13-554M15.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
175-197
0.034
0
XXbac-BPG27H4.8
hsa-miR-150-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000442852
Biotype: lincRNA
Gene id: ENSG00000237923
Gene Name: XXbac-BPG27H4.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
99-105
0.025
1
7mer
24-34
0.009
1
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